Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0682 ATGCTCTGCTTCCCTGTGGTGCTCGTGCACTTTCCATTACAGATAGGCTCCTTGCTTTACTCAGCTTTGTTATGGCTGAAGTTGATGAGAAATTCTGGGAACATTGCTGCAGTGACACCATTAGAGAAAGACAGGGGATGGATTGGAATTTGTGGCAAAGAAGCTTCTTATGTTCCAATCATTTTTGTCCAGAATGCTGTCACAAAAGGAGCTGTTTGTTTGGATGGGAGTGCACCAACTTACCATCTTGATAGGGGATTTGAAGAAGGGATAAACAATTGGTTAGTTCAGTTTGAGGAGCTTCGCTGCTTCCAAACTGTTACTTGCTACCAGGTTGTGGTTAATAACTTGGAAGATGCTCATGAGATCCTTGACACTGCAATCTCAACCGCACTGAAAGAAAGCAAACCTGTTTATATCAGCATCAGCTGTAACTTGGCTGCAATTCCTCACCAGTCACCCCACTTTCAATTGAGTAATCAAATGGAGTTGCAGGCAGCAGTAAAGGCTGCAGCTGACTTCCATGGCAACATGAGTGTCTAA 543 0.4383 MLCFPVVLVHFPLQIGSLLYSALLWLKLMRNSGNIAAVTPLEKDRGWIGICGKEASYVPIIFVQNAVTKGAVCLDGSAPTYHLDRGFEEGINNWLVQFEELRCFQTVTCYQVVVNNLEDAHEILDTAISTALKESKPVYISISCNLAAIPHQSPHFQLSNQMELQAAVKAAADFHGNMSV* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0682 180 Pfam Pectinacetylesterase 53 162 IPR004963 GO:0016787
Amo10g0682 180 PANTHER PYRUVATE DECARBOXYLASE 99 175 IPR012110 GO:0016831
Amo10g0682 180 PANTHER - 99 175 - -
Amo10g0682 180 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 84 152 IPR029061 -
Amo10g0682 180 Gene3D - 48 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0682 Amo-Chr10 8774855 8779428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0682 50 139 Carbohydrate Esterase AT4G19420 41.758 9.35e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0682 K01568 - ahf:112722316 126.716