Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0634 GTTTTCGTTATTTTGAGATTTGATTGTTCTTCTTCTTGCGCGTCTTCCCTCCTTCTTCTCCATCGTTCTTTTCCTCTCCTTTTCTCACTGGTATGTTCTTCGTTTACGTTACTTTCCTCTCTTTGTGCAACTCGAGTTTCGTTTTCTATTTTAATTTGTTGTTTTCTGAAATCAAAGTTTGAACTCGTTTTGAAGATAATGGATCATTTAACCTCGGATTGTCAGCTGAATCCAGGCGAGGTGGATTATGAATTTGAATCTAATGAAGTTCCTGAGGTGTATTATATCAGACATGATTGGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGTTGCAGAGCGAAAATGGAAATCTAAAATATCTCCGACCAAGAAGACAAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAAGGAACTAAGCCTGTCCATTCGTCGTACAATAGAGAATAATGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTTGCGGCTGCCGGGGGTCACCGCGAGGAGCAAGCAGAGAGAGAATCAGATGCTGCAGATTTTCATACGGTCATACCGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGGAAGTCCAAGCGCAATTCAGAGGAAAGGCAAATTGCATCACCAGATTAACGAATTCCGCTCTAGGCTATTCAGTATACGAAGTCGGAGAACCAAGTTCCAGCTCAATATTTGACAAGTTCGTGGTTACCTACGACTCAGTTGCAGCCGAGGGAAAATGCCAATGCTTATTTTTCGAGTCGAGAGGGATACTCTGTCGTCACGCACTAAGCGTGTTAACCTTTGAACAAGTAAGCCACGTGTCACCTAGACTTATATATATTGAAACGATGGAGCAAGAAGGTAAAGAGGCGACACACACACACATCAAGAGCAGCCACGACGAACCACTGATGGAGCCAAGAAACAAGAGATTTGACCCCAATTGGTTTTTTGTCCGCAAAATATTTGCGAATTTGCATCCGAATCGGAAGAGCTGA 1191 0.4299 VFVILRFDCSSSCASSLLLLHRSFPLLFSLVCSSFTLLSSLCATRVSFSILICCFLKSKFELVLKIMDHLTSDCQLNPGEVDYEFESNEVPEVYYIRHDWVGMTFTTLEDAGKFYRNYAKVAERKWKSKISPTKKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHKELSLSIRRTIENNEEAGIRPSKTYQSFVAAAGGHREEQAERESDAADFHTVIPCATKSSIEAQFQDVYTHQKFREVQAQFRGKANCITRLTNSALGYSVYEVGEPSSSSIFDKFVVTYDSVAAEGKCQCLFFESRGILCRHALSVLTFEQVSHVSPRLIYIETMEQEGKEATHTHIKSSHDEPLMEPRNKRFDPNWFFVRKIFANLHPNRKS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0634 396 ProSiteProfiles Zinc finger SWIM-type profile. 298 334 IPR007527 GO:0008270
Amo10g0634 396 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 201 343 IPR031052 GO:0006355
Amo10g0634 396 Pfam SWIM zinc finger 300 330 IPR007527 GO:0008270
Amo10g0634 396 PANTHER OS03G0843700 PROTEIN 201 343 - -
Amo10g0634 396 SMART 26again6 309 336 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0634 Amo-Chr10 7545359 7548180 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g0634 SWIM 2.6e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0634 - - adu:110278638 270.011