Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0623 ATGGAGTTGGACAACTGCCACAGCTTGATTTGGGTGAATCTCAACACCAATAAACTGACCGAAGCAATTCTGTCGGGAGTTTTTCAAATAGTTGAAGAAGATTACGCATTAACAACAATGGGTCTCTCAAATTACCCGTATGCTGCTGAAGGGGTGATACCTTTAATTGTGATGAACACGGTTATGTCTGTTGCTATATTGAAGAACATGTTTAGATCGGTGCTTCAAGCTGTTGGTGCCACCAGTTCTTCAGATACCGCTTCTTCAGATTACCCAACGTATATTAGCATGTTTGAAGACACAACATCATGTGAAAGTTCGGGTTGTTCTAGGCCAAGAAGGGTGTCCATAACACAGTACAAGTCATTGTGCCACAACAACAATAATAAGAGTGTTATGTTGGAGTGTTGCGTGTGCCTCACAGGGTTCGAAGCGAATCAAGAGGTTAGCGAGTTGCCTTGCAAGCATTTCTTCCACACAAGCTGCTTAGACAAATGGTTTGACAACTGGCACACCACTTGCCCTTTGTGCCGTTCGTTCTCCTAG 546 0.4359 MELDNCHSLIWVNLNTNKLTEAILSGVFQIVEEDYALTTMGLSNYPYAAEGVIPLIVMNTVMSVAILKNMFRSVLQAVGATSSSDTASSDYPTYISMFEDTTSCESSGCSRPRRVSITQYKSLCHNNNNKSVMLECCVCLTGFEANQEVSELPCKHFFHTSCLDKWFDNWHTTCPLCRSFS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0623 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 180 IPR013083 -
Amo10g0623 181 Pfam Ring finger domain 135 178 IPR001841 -
Amo10g0623 181 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Amo10g0623 181 PANTHER F21J9.24-RELATED 40 180 - -
Amo10g0623 181 SMART ring_2 136 177 IPR001841 -
Amo10g0623 181 PANTHER - 40 180 IPR044249 -
Amo10g0623 181 SUPERFAMILY RING/U-box 135 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0623 40 179 C3H Transcription Factor Family AT2G04240 35.811 2.09e-23 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0623 K16285 - gmx:100811790 172.94