Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0609 GAGATTCAGAAAGGAGAGAGAGCTCGCCTCGCCGTCGTCGTTGCTGTCGCCACCACAGTTCATCGCCTCTCCAGATCTGGTCACAACACCCAAGCCTCTGAGGATGTTCCATTACGATCTCCTCAACGAGACACAGAACAAGCTCGATTACATTCTCTCTCTCTCACTGTCGAGAACTTCCTCGGGCGCCGCCTCCATATTCTTGTCTTCAAGTCCGTCATGGCCAAGTCCATCCATCAGTGCATATTAGAATCTAATTTCTTAAACATTCAAGTAGCTCAAAATTATAGTCTGATCTCTTCGTTGAAGAAGCTCTCAACTGTTGGATTGTGGGAGAGTAAAAAGAAAGCCTCAGTGGAGGCACAACTCAAGATAATTGAGGAAAACTTGAAAAGAAAGAAAGCAGAATATGCAGAAAATATGAAGAATAAGATAGCTGATATTCATAGGTCAGCAGAAGAGAAAAAGGCAATGATTGAAGCTCAAAAGAAGGAAGAGTTTATCGAGTTAGAGAAAACAGCTGCAAAATTTTGTAGTAGTGCAAAAATCAGAAGTAGAAGTAGCCATAAACTTGATCTTCTGTAA 585 0.4205 EIQKGERARLAVVVAVATTVHRLSRSGHNTQASEDVPLRSPQRDTEQARLHSLSLTVENFLGRRLHILVFKSVMAKSIHQCILESNFLNIQVAQNYSLISSLKKLSTVGLWESKKKASVEAQLKIIEENLKRKKAEYAENMKNKIADIHRSAEEKKAMIEAQKKEEFIELEKTAAKFCSSAKIRSRSSHKLDLL* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0609 194 Pfam Remorin, C-terminal region 103 185 IPR005516 -
Amo10g0609 194 PANTHER OS02G0117200 PROTEIN 102 181 - -
Amo10g0609 194 Coils Coil 116 147 - -
Amo10g0609 194 PANTHER CARBOXY-TERMINAL REGION REMORIN 102 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0609 Amo-Chr10 6943495 6945167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0609 44 80 Cytoplasmic Ribosomal Protein Gene Family AT5G15200 63.158 9.69e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0609 - - gmx:100305683 113.62