Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0599 ATGGGAAAGAAAGGTGGATTGTTTCGTTATGCTGATGGAGTTGACAAATTGCTATTGTTGTTTGGGACTATGGGTTGCATAGGGGATGGGCTACAAACACCTATCACAATGTTTGTTTTTGGGAGTTTGATTGATGATTATGCACGTGGTTCTGGAGATTCTGTTCCTAAGCATATCATAGACAAGTACGCTCTCAAGTTGCTGTATATTTCCATCGGGGTTGCTGTATGTGCTTTTGTTGAAGCAGTATGTTGGACAAGAAGTGCAGAAAGACAAAGTTGTCGCATGAGAATTGAATATCTTAAATCAGTTCTGAAACAAGATGTTGGCTTCTTTGACAAGCAAACCGATAGTGATTCTTCAAAGACCTTCCAAGTAATTTCTACCATAACTTCTGATGCCCAAACAATCCAAGACACCATGGCTGATAAG 432 0.3981 MGKKGGLFRYADGVDKLLLLFGTMGCIGDGLQTPITMFVFGSLIDDYARGSGDSVPKHIIDKYALKLLYISIGVAVCAFVEAVCWTRSAERQSCRMRIEYLKSVLKQDVGFFDKQTDSDSSKTFQVISTITSDAQTIQDTMADK 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0599 144 Gene3D ABC transporter type 1, transmembrane domain 5 144 IPR036640 GO:0005524|GO:0016021
Amo10g0599 144 PANTHER ABC TRANSPORTER B FAMILY 5 144 - -
Amo10g0599 144 PANTHER ABC TRANSPORTER B FAMILY MEMBER 15 5 144 - -
Amo10g0599 144 SUPERFAMILY ABC transporter transmembrane region 7 142 IPR036640 GO:0005524|GO:0016021
Amo10g0599 144 Pfam ABC transporter transmembrane region 21 143 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo10g0599 144 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 33 143 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0599 Amo-Chr10 6812557 6814978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0599 7 144 Calmodulin-binding Proteins AT2G36910 34.286 2.52e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0599 K05658 - gmx:100804664 223.787