Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0587 ATGGCTGGAATTCACAAAATTGCAGACATCAGTCCTACAATTGACAATTTCTGTGTACGTATACGAGTGATACGGTTATGGACAGTACCAAGTTACGAAAATTCTCTATCGCCATACTCAATTGAGATGGGAGGAAAAATACACGCCTCAATTAAGCGGGCTTTTATGTCTCGATTCGTGAATTTGTTGGAGGAAGGAATATCTTACCAAATAAGATACTTTGGTATTGGACTGAATAAGGGTTACTTCAAGACTACACATCATGAGTACGTGGTTAATTTAAACCAGCATACTGATGTGCACAAACTTTCAGAATCGTCAAGTATCCCACGATATAGATTTAAGTTTGTGAGTTTTGACACTCTCAATGCTCTTGGGTATGATTGCACCTATTTAGTTAGTAAGTTTATTATTTTAGAAAAAGTATAA 429 0.3613 MAGIHKIADISPTIDNFCVRIRVIRLWTVPSYENSLSPYSIEMGGKIHASIKRAFMSRFVNLLEEGISYQIRYFGIGLNKGYFKTTHHEYVVNLNQHTDVHKLSESSSIPRYRFKFVSFDTLNALGYDCTYLVSKFIILEKV* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0587 142 Pfam Domain of unknown function DUF223 43 120 IPR003871 -
Amo10g0587 142 Gene3D - 3 105 IPR012340 -
Amo10g0587 142 CDD RPA1_DBD_A_like 18 100 - -
Amo10g0587 142 SUPERFAMILY Nucleic acid-binding proteins 2 107 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0587 Amo-Chr10 6628427 6628987 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0587 4 122 Core DNA Replication Machinery Family AT5G08020 25.197 4.98e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0587 - - ahf:112805939 239.195