Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0573 CCATGCATTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCCTTGGGATACTTATTATGGAAATAATTACCGGAAGAAGTCCTGTTAATTTAATTGAATGGTTGAAAGCTATGGTTGGCAATAGAAAATCAGAGGAACTCATTGATCCGAATCTTCCTGAAAAGCCATCTTCAAAAGTTCTTAAGCTTTGCTCTAGACCTAAAATCGGACAAATAATCCACATGCTTGAGGCCGACGAGATCCTATTCAGTGATGAACGGAGGACTGGAGGGGAATCGTTGCGATCCCATGGCAATTATCATCATGAGCAAAAGGACTCTAACAGAGATAGAAAGCAAATAGGTGAAGAGATTACTGATTGA 363 0.3994 PCIGMLTEKSDVYSLGILIMEIITGRSPVNLIEWLKAMVGNRKSEELIDPNLPEKPSSKVLKLCSRPKIGQIIHMLEADEILFSDERRTGGESLRSHGNYHHEQKDSNRDRKQIGEEITD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0573 120 Pfam Protein tyrosine and serine/threonine kinase 6 66 IPR001245 GO:0004672|GO:0006468
Amo10g0573 120 MobiDBLite consensus disorder prediction 90 120 - -
Amo10g0573 120 Gene3D Transferase(Phosphotransferase) domain 1 3 92 - -
Amo10g0573 120 PANTHER OS01G0323000 PROTEIN 2 113 - -
Amo10g0573 120 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 2 113 - -
Amo10g0573 120 SUPERFAMILY Protein kinase-like (PK-like) 5 74 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0573 Amo-Chr10 6327750 6328418 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0573 4 80 Receptor kinase-like Gene Family AT2G48010 32.323 5.36e-12 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo10g0573 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0573 - - aip:107626519 188.734