Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0569 ATGGCTTCTCTCTTACCTTGTGCGCCGCCCAACATAGCTTCTACTCCGTTCGGGAACCGGACTGGGTTCCCTCTGCTGAACCGGTCTCACTCCTACGCTGTTCCCGCTTCGACCAGGAGCTTCCTCCGCGGGTCGCTTTCGGTGGCCCGGTTCGGGTTCAAACCCGGGTTCTTGCCGGAGCCCGACGCCGCCGGAGAGGTGTTAAGGGAGCTGTTCGATAGGGCGGAAGGGTTCCTCTACACGATTGCGGATGCCGCCGTCTCGAATTCCGACACAGCGGCGACGGCGACAACCACCGCCAAACAGAACAACGATTGGCTCTCGGGGATCACCAATTACATGGAAACTGTGCTCAAGGTACTCAAAGATGGACTTTCTACTTTGCATGCGCCATATGCTTATGGTTTTGCAATTATACTGCTCACAGTTCTCGTAAAAGCCGCCACCTTTCCGTTGACAAAGAAACAGGTAGAATCTGCCATGGCTATGCGATCACTGCAACCTCAAATAAAAGCTATCCAGCAACGTTATGCTGGTGATCAGGAGAGAATTCAACTTGAAACTGCTCGGTTGTATAAATTGGCCGGCATTAATCCTCTAGCAGGATGCTTGCCTACACTTGCAACAATACCAGTCTGGATTGGCCTATATCGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTACAGAAGGTTTCTTCTGGATACCTTCTCTTGCTGGTCCAACAACGGTTGCTGCTCGTCAAAATGGAAGTGGTATCTCTTGGCTTTTTCCATTTGTGGATGGTCACCCTCCCCTTGGATGGTCAGACACATTGGCTTACCTTGTCTTGCCCGTGTTGCTGGTAGTCAGTCAGTACATCTCTGTCCAAATAATGCAGTCATCACAGCCTAATGATCCCAACATGAAGAGTTCTCAAGCCATCACCAAGCTCCTTCCATTAATGATTGGTTATTTTGCTCTTTCAGTTCCTTCTGGACTAAGCCTTTATTGGTTAACAAATAATATATTGAGCACTGCTCAACAAGTATGGCTTCAAAAATTAGGGGGTGCCAAAAATCCTATAGTTCAAATTCAAGATGATATTATGAAGGATGACCAAATGAAGATTCCGAAGTCGGTACCTAAAGTAAATTCCACGAAAACAGAAGCTAGACAAGATGAGAAATCAACATCAGGGGGGCCACAGCCTGGTGAAAGATTTAGGCAACTTAAAGAGCAAGAGGCAAGGAGAAGACAACAAAGAGAAGAAGAAAAAAGGAAAGCCGCGGAAGCAGCATCTAAAGCAACTAAAGTATATGAGACTAATGAGATAACAGTTGAAGAGGGAAATCAAGATGGGGATGATAATGTTGAAAATTCTCAGCATGTTAACACTGATACTGATCCATCCACATCTCAAGTCACTGTAAATGGTAATCCACTAAGCAAAGACTTGGAAGAAAATCAGAATTCCACATATACACCTCAGAGGGAAAGTAATGAAGGTTCTCCTTTCAACAATGGAGTAAACGAGAAAAGTGTAGATGAGGAACCAAGGGAAGCATTCACAACTACAGCTACCACCAAGAAGCAACATCCTGAAGAACAATCGGATCACCTGGCAAAGGATTGA 1617 0.4613 MASLLPCAPPNIASTPFGNRTGFPLLNRSHSYAVPASTRSFLRGSLSVARFGFKPGFLPEPDAAGEVLRELFDRAEGFLYTIADAAVSNSDTAATATTTAKQNNDWLSGITNYMETVLKVLKDGLSTLHAPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTVAARQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPVLLVVSQYISVQIMQSSQPNDPNMKSSQAITKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQVWLQKLGGAKNPIVQIQDDIMKDDQMKIPKSVPKVNSTKTEARQDEKSTSGGPQPGERFRQLKEQEARRRQQREEEKRKAAEAASKATKVYETNEITVEEGNQDGDDNVENSQHVNTDTDPSTSQVTVNGNPLSKDLEENQNSTYTPQRESNEGSPFNNGVNEKSVDEEPREAFTTTATTKKQHPEEQSDHLAKD* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0569 538 MobiDBLite consensus disorder prediction 402 428 - -
Amo10g0569 538 PANTHER OXA1 26 471 IPR001708 GO:0016021|GO:0032977
Amo10g0569 538 Coils Coil 402 427 - -
Amo10g0569 538 PANTHER BNAA09G28180D PROTEIN 26 471 - -
Amo10g0569 538 MobiDBLite consensus disorder prediction 367 538 - -
Amo10g0569 538 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 134 348 IPR028055 -
Amo10g0569 538 MobiDBLite consensus disorder prediction 451 505 - -
Amo10g0569 538 Pfam 60Kd inner membrane protein 134 348 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0569 Amo-Chr10 6208942 6215238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0569 71 420 Chloroplast and Mitochondria Gene Families AT2G28800 56.980 1.30e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0569 K03217 - gmx:100802546 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0995 20 17417788 17424149 Amo10g0569 10 6208942 6215238 hybridization