Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0534 ATGGCTTCATTTTCTCTCTTCTTCCTTTTTACACTTCTTCTACTACCACCGTATTCTCTTTGCCAACTTCAAGAATTTGTGAGCATTGACTGTGGTGGAACAAGCTACTACAATGATTCAACAACAGGGTTGCCATGGATTCCGGATTCTGAGATCATGAAACATGGCAAAGCTGTGGAAGTTCAAAACCCAAATAGTGGCAGCAATATGATTCCTCTTCAGTACAAGACAAGGAGGGACTTTCCAATAGACAGCAGAAAGTACTGTTACACACTGAAAACTGAGGAGAGGAGAAGGTACCTTGTCAGAGCAAGTTTTCAGTATGGGAACTTGGGAGATGGAGACACATACCCTCAATTTCTGCTCTTCTTGGATGCAACAAAATGGGCCACTGTGTCAGTCTATGATGCATCAAGGGTCTATGTGAAGGAGATGATTTTCAGAGCACCCTCGGACTCTGTTGATGTTTGCATGTGTTGTGCCACCACTGGCTCTCCATTCATATCCACACTGGAGCTTAGGCCCTTGAATGTGTCAATGTATGCCACGGACTTCGAGGATGATTTCTTCTTGAAAGTGGCTGCAAGGATTAACTTTGGTGCTACTAGTGAGCATGCTGTCAGGTATCCAGATGATCCATATGATAGAATCTGGGATTCGGATCTCATTAAAAGACAAAATTTTCTTGTTGGGGTGGCCCCAGGCACAATTAGAATTAACACAACAAAGAACATAAATATACAGACAAGGGAATACCCTCCTGTTAAAGTGATGCAAACCGCGGTTGTAGGCACAAAACGGGTACTCAGCTACAGATTGAACCTTGAAGACTTCCCTGCCAATGCTAGAGCTTACGCATATTTTGCGGAGATCCAAGATCTCGGTAAGAACGAGACCCGAAAATTCAAATTGGAGCAACCTTATATACCTGACTATAGCAATGCAGTGGTTAACATAGCTGAGAATGCAAATGGTAGCTACACTCTATATGAACCAAGTTATATGAATGTGAGTCTGGATTTTGTTCTTTCCTTCTCCTTTGCTAAGACCAGGGATTCTACTCAAGGACCTCTTCTAAATGCAATGGAAATAAGCAAATATGTTGAAATCGCTTCCAAAACTGACAAAGAAGATGTAAATGTAATAAATGTGTTTCGCTACTTGTCTTCTGATACTGACCCAAATAATGGGGATCCCTGTGTTCCAACACCCTGGGAGTCGGTTAATTGTAGTGCAACTACCCCTCCAAGAATCACAAAGATAAACCTGTCAAGAAGGAATGTGAAAGGTGAAATTCCACAAGAGCTCAACAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGTAACTTGCTTACAGGAACACTACCTGACATGAGCAATCTTATCAATCTAAACATTGTGCATTTAGAGAACAACAAATTGACTGGTCCATTACCGTCTTACTTGGGTAGTTTGCCAAATTTGCAAGCACTGTTTATACAGAATAACTCATTTAGCGGAGAAATACCAACAGGACTATTATCTGGAAAAATCATTTTCAACTATGATAATAATCCTGAACTACATAGAGGGAACAAGAAGCATTTTCAGTTGATACTAGGAGCTTCAATTGGAATACTAGTAATATTATTACTATTATTCTTAACAAGTCTTCTGCTAATGCATAATGCACGGAGAAAGGCGTCTAAACAGAAATGTGATGAAAAAGGGATTTCCAGAGGTAGTACAAAGCCATTGACCGGATATTCATTCGGTAAGGGTGGGACTTTAATGGATGAGGGTACTGCTTACTATATTTCACTTTCGGAGTTGAAAGAAGCTACTAATAACTTTTCGAGGAAAATCGGGAAAGGAAGCTTTGGATCTGTCTACTATGGGAGAATGAAAGATGGAAAGGAGATTGCGGTTAAGACTATGACTGATCCATCCAGCCATGGGAACCAACAATTTGTGACTGAGGTAGCTCTCCTCTCAAGAATTCATCACAGAAACTTGGTTCCTTTGATTGGATATTGTGAAGAAGAATATCAGAATATTCTTGTTTACGAGTACATGCACAATGGCACATTAAGGGATCACCTTCATGAAGGTTCGAGTCAGAAACAATTAGACTGGTTAGCACGGCTTCGGATTGCAGAAGATGCAGCGAAAGGTTGA 2160 0.4074 MASFSLFFLFTLLLLPPYSLCQLQEFVSIDCGGTSYYNDSTTGLPWIPDSEIMKHGKAVEVQNPNSGSNMIPLQYKTRRDFPIDSRKYCYTLKTEERRRYLVRASFQYGNLGDGDTYPQFLLFLDATKWATVSVYDASRVYVKEMIFRAPSDSVDVCMCCATTGSPFISTLELRPLNVSMYATDFEDDFFLKVAARINFGATSEHAVRYPDDPYDRIWDSDLIKRQNFLVGVAPGTIRINTTKNINIQTREYPPVKVMQTAVVGTKRVLSYRLNLEDFPANARAYAYFAEIQDLGKNETRKFKLEQPYIPDYSNAVVNIAENANGSYTLYEPSYMNVSLDFVLSFSFAKTRDSTQGPLLNAMEISKYVEIASKTDKEDVNVINVFRYLSSDTDPNNGDPCVPTPWESVNCSATTPPRITKINLSRRNVKGEIPQELNNMEALTELWLDGNLLTGTLPDMSNLINLNIVHLENNKLTGPLPSYLGSLPNLQALFIQNNSFSGEIPTGLLSGKIIFNYDNNPELHRGNKKHFQLILGASIGILVILLLLFLTSLLLMHNARRKASKQKCDEKGISRGSTKPLTGYSFGKGGTLMDEGTAYYISLSELKEATNNFSRKIGKGSFGSVYYGRMKDGKEIAVKTMTDPSSHGNQQFVTEVALLSRIHHRNLVPLIGYCEEEYQNILVYEYMHNGTLRDHLHEGSSQKQLDWLARLRIAEDAAKG* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0534 719 PANTHER - 19 718 - -
Amo10g0534 719 Gene3D Ribonuclease Inhibitor 376 527 IPR032675 -
Amo10g0534 719 ProSiteProfiles Protein kinase domain profile. 610 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0534 719 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Amo10g0534 719 Pfam Protein tyrosine and serine/threonine kinase 612 719 IPR001245 GO:0004672|GO:0006468
Amo10g0534 719 PANTHER OS07G0107800 PROTEIN-RELATED 19 718 - -
Amo10g0534 719 Gene3D Transferase(Phosphotransferase) domain 1 592 719 - -
Amo10g0534 719 Pfam Malectin-like domain 29 366 IPR024788 -
Amo10g0534 719 SUPERFAMILY Protein kinase-like (PK-like) 595 719 IPR011009 -
Amo10g0534 719 SUPERFAMILY L domain-like 401 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0534 Amo-Chr10 5720449 5726360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0534 11 719 Receptor kinase-like Gene Family AT1G67720 67.275 0.0 978
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Amo10g0534 Malectin_like 3.2e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0534 - - gmx:100807148 1177.54