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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Amo10g0529
CAAAGAAACCAACCCAAATATTTTTTTGAACTCACAACACAACACAAGCACTACTTAGGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGAGAAGCATGGACAATAATAATGGTTGCTTCTCTTCACCAAGACGTGATGCTTTTCCAGCAGGTCTAAGAGTCCTTGTTGTTGATGATGACCCAACATGGCTTAGGATCCTTGAAAAGATGCTCAAGAAGTGTTCCTATGAAGTGACAACATGTTGTTTGGCGAGGCATGCTCTACACTTGCTTCGCGAAAGGAAAGACGGGTATGATATAGTGATCAGCGATGTGAACATGCCTGACATGGATGGATTCAAACTTCTAGAGCATGTTGGACTTGAGATGGATCTTCCTGTGATTATGATGTCTGTTGATGGAGAAACAAGCAGGGTGATGAAAGGTGTTCAACACGGAGCATGCGATTATCTGCTTAAGCCTATAAGGATGAAGGAACTGCGAAACATATGGCAGCATGTCTTTAGGAAAAGGATACACGAGGCGAGAGAATTCGAGAGTTTTGAAGGTTTCGAGAGCATTCACCTGATGAGAAACGGATTGGAGCAATGCGATGATGGGAACCTGTTTGCCCTTGAAGACATGACCTCAACTAAGAAAAGAAAAGATGCAGATAACAAACACGATGACAGAGAATTGATAGATCCATCATCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTGGATCTTCACCAGAAGTTTGTTAAAGCAGTGAATCAAATTGGATTTGATAAAGTTGGTCCAAAGAAAATACTAGATCTCATGAATGTTCCTTGGCTGACTAGAGAAAATGTTGCAAGCCACTTGCAGAAGTATCGGCTTTACCTAAGCCGGCTTCAAAAAGAGAACGATCTGAAGTCGTCTTCCTCAATCGGAATGAACCCGGATTTAGCCGCAACAGATCTAGGGAGTTTTGTTGGAGTTCAGAACTCAGTGAGCAAGAAACAAAATGATGTTTCAATTGACAGCTGCAGTTATTCAGAAGGAGCACTGCAACTTCAGAACATGGAAACCAAAACTCATGAAGGTAGCAGTGATCCAAACGGAACTATTTCTCCGCCTGCCACTACAGAAAAAGGAAGAACTATGATCAGAAACTTTGTTTCCGAGAAAAAGATGAGAAAGAACCAACCTTTTGACTCTCTTGAGCCGGAAGGAAACCACACAGCAGTAATTGATTGCTCCATTCCAACACAATTCTCTTGGAATGAAGTTCCAGAAATTCAACTCAAAGATCACAAGCCACTTGTTCAGTTAGAGGGTAACTTAAGCCACAAGTTTCCAGTAACAGGTAAGAAGCACCAAATCCAAGTTGATCATCAATCACCATCAATTGGTTCGATTGGTTCTCCATCTTTGACAGGGGAGGAGGTCACGGCATGCATCAAAACAAAACCTTTGTGTGCAGATTACAAGTGTGAATACAAGAGTTCCGTGAGTTCGATAGGATCGGCAGTTGACAATAACACGTTCCCTATTGAACCAGGAAGCCTTATGATGAATGATCCATCAACAGCACCAATTTCAACTACAAATTCGGGATTGAAAACACAAGCATCTAACCTCAACAGCATTTCGGATATGGAATTTTGCCAGAGAAACCTACTTTTGGATGCAGTTTCGCTACCGTTGGACGATGATCTGCATTTTAATTGGCTACATGGGGAATGCTCTAACATCAACTTCAGCCTGCAGAACATAGGGTATTATGATCCAGGGCTTATTGCAGAAATTCCAACTCATTACTATGATTCAGCAGCAGATTATGCAGTCATAGATCAAGGTCTATTCATATCATGA
1908
0.4214
QRNQPKYFFELTTQHKHYLGLSLSLSLSLSLSLSLSLSLSLSLSLSLSLSLCVRSMDNNNGCFSSPRRDAFPAGLRVLVVDDDPTWLRILEKMLKKCSYEVTTCCLARHALHLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESFEGFESIHLMRNGLEQCDDGNLFALEDMTSTKKRKDADNKHDDRELIDPSSTKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRLQKENDLKSSSSIGMNPDLAATDLGSFVGVQNSVSKKQNDVSIDSCSYSEGALQLQNMETKTHEGSSDPNGTISPPATTEKGRTMIRNFVSEKKMRKNQPFDSLEPEGNHTAVIDCSIPTQFSWNEVPEIQLKDHKPLVQLEGNLSHKFPVTGKKHQIQVDHQSPSIGSIGSPSLTGEEVTACIKTKPLCADYKCEYKSSVSSIGSAVDNNTFPIEPGSLMMNDPSTAPISTTNSGLKTQASNLNSISDMEFCQRNLLLDAVSLPLDDDLHFNWLHGECSNINFSLQNIGYYDPGLIAEIPTHYYDSAADYAVIDQGLFIS*
636
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Amo10g0529
635
TIGRFAM
myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class
257
310
IPR006447
GO:0003677
Amo10g0529
635
SUPERFAMILY
Homeodomain-like
255
314
IPR009057
-
Amo10g0529
635
Gene3D
-
75
256
-
-
Amo10g0529
635
SMART
REC_2
75
187
IPR001789
GO:0000160
Amo10g0529
635
PANTHER
TWO-COMPONENT RESPONSE REGULATOR
47
612
IPR045279
GO:0009736
Amo10g0529
635
PANTHER
TWO-COMPONENT RESPONSE REGULATOR
47
612
-
-
Amo10g0529
635
SUPERFAMILY
CheY-like
74
203
IPR011006
-
Amo10g0529
635
ProSiteProfiles
Response regulatory domain profile.
76
191
IPR001789
GO:0000160
Amo10g0529
635
Pfam
Myb-like DNA-binding domain
259
309
IPR001005
-
Amo10g0529
635
Pfam
Response regulator receiver domain
77
186
IPR001789
GO:0000160
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Amo10g0529
Amo-Chr10
5614364
5617749
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Amo10g0529
69
315
Response Regulator Gene Family
AT2G25180
56.800
7.33e-82
268
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GARP-ARR-B
Amo10g0529
Response_reg
3.5e-24
CL0304
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Amo10g0529
-
K14491
gmx:100797421
785.793
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Amo20g0959
20
16178045
16181743
Amo10g0529
10
5614364
5617749
hybridization
Amo10g0529
10
5614364
5617749
Amo13g5582
13
157544652
157547421
PCT
Amo13g5582
13
157544652
157547421
Amo10g0529
10
5614364
5617749
PCT
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