Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0494 ATGGAAACAAGCACCAAAGAAAGCTTAGAACTCAAGAAAGTGGATTGTGATGCATCGGAGATTGAGTATGTTAGTTATGGTGGCGAGCACCACCTCCCCCTTATCATGAATCTAGTCGACCAAGAACTCAGCGAGCCGTACTCCATATTCACGTATCGTTACTTTGTATATCTCTGGCCTCAGCTCTCTTTCCTGGCATTCCACAAGGGTAAATGTGTCGGCACGGTGGTTTGTAAGATGGGCGACCATCGAAACATTTCCAGAGGATACATTGCCATGTTGGTTGTGATCAAGCCCTATAGAGGAAAAGGCATTGCTACAGAACTTGTTACTCGGTCTATTAAGGTGATGATGGAATCTGGTTGTGAAGAAGTTACTCTGGAATCAGAAGTTACAAACAAAGGAGCATTGGCACTCTATGGTCGCCTTGGCTTTATTAGGGCTAAGAGGCTCTTTCATTATTATTTGAATGGAGTCGATGCTTTCCGGCTCAAACTGCGATTCCCTCGGCCGGAGCTGCACCCATCTCTGCCTGTGATGGCAGATAAATATGGTAGTAGTCATATACCAAGTGATCTTGATAATTCAGCATTTGAACAATGA 603 0.4444 METSTKESLELKKVDCDASEIEYVSYGGEHHLPLIMNLVDQELSEPYSIFTYRYFVYLWPQLSFLAFHKGKCVGTVVCKMGDHRNISRGYIAMLVVIKPYRGKGIATELVTRSIKVMMESGCEEVTLESEVTNKGALALYGRLGFIRAKRLFHYYLNGVDAFRLKLRFPRPELHPSLPVMADKYGSSHIPSDLDNSAFEQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0494 200 Gene3D - 28 178 - -
Amo10g0494 200 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 29 170 IPR016181 -
Amo10g0494 200 Pfam Acetyltransferase (GNAT) family 56 145 IPR000182 GO:0016407
Amo10g0494 200 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 19 169 IPR000182 GO:0016407
Amo10g0494 200 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 7 168 IPR044542 GO:0004596|GO:0017196
Amo10g0494 200 CDD NAT_SF 63 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0494 Amo-Chr10 4971137 4972564 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo10g0494 Acetyltransf_1 4.4e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0494 K00670 - gmx:100806790 339.732