Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0480 AATTGGCCTCAGAATGGCAACGATCCTTGTGGACAGTCTTGGAAAGGCATTAGTTGCAAGGACAATCGCGTCACTGAGATCAAGTTACCTGGTCTTCAACTTGGTGGAACTTTGGGTTACCATGACTTGAGTAACAACAATCTTGGTGGCAGCTGGTACCAACTCCCTCCAAATTTGCAGCACCTAAACCTCGCTAATAATAATTTCAATGGGCCGATCCCATATTCGATCTCTCAAATGCTTCGCTTAAAATTACCTTTCCAACAAGGATTGACTGTTGACTTTTCAAAGCTTACTTCCCTCTCTACACTGGATCTTTCGTCCAATTCGCTGACAGGGGATCTCCCTCAGACAATGAGCTCACTTTCGAGCTTGTCCAACCCCTTGAATGTGGAAAACAATCATTTTACAGGCTGGATACCGGAACAGCTGAATGGCATAGACCTACAAAATAAGGTGCGTAATTCATGGAGCTCGGGGCCTGCGCCCCCTCCACCTCCTGGGACACCTCCAGCAACAACCAGCCGTCACCACAAATCCGGTGGGCACGGCAGCTCATCAGGTGGTAGCTCTAGTGATGGGGGTAAAAAATCTGGTATTGGAGCCGGTGGCGTTGCTGGAATAGTGATCTCCATATTGGTTGTTGGGGCAATAGTAGCATTCTTCCTGGTGAAGAGAAGATCCAAGAAGTCGTCGTCATTAGACACGGAAAAGCTTGACAATCAGCCGTTGGCTCCTCTAGCTTCAAATGAAGTGCACCAGATGAATTCTATGCAGAGTTCCTCTGTGATTGACTTGAAAACATTTGACACTCCTGTGGAACCAATAAATGTTAAACCCCCTATTAAACCCCCACCTCTCAAATCATTCGACGAGGAAGAAATTCCAAAGAAGCCAACTGCTGTCAAGAAGACTGTCGCCGCTCCCGCAAATGTGAAAGCATATTCTATAGCTGACCTGCAGATTGCTACTTCAAGCTTCAGTGTGGATCAACTCCTTGGTGAGGGGTCTTTCGGACGTGTATACCGTGCACAATTCGATGATGGAAAGTTCTTGCGAGTAAAGAAGATAGATTCATCTATCATTCCCCATGATTCATCCAACGATTTTGTGGAAGTAGTCTCAAACATCTCCCATTTGCATCATCAAAATGTGACTAGAGCGATTTGTTTGGTTATTGTTGTTGGAAAAGGCGCCCATGGACAACACCTCTTGGTCTACGAGTTCCATAAAAATGGATCGCTGCATGACTTCCTTCACCTACCTGATGAGTACAGCAAACCATTGATATGGAACTCTCGTGTCAAGATCGCTCTAGGGACAGCTCGCGCCTTAGAGATATTTAGTCAACCAAACAGTATTGCTGATTCAGATCTTAACCCTCATCTTTCAGATTGTGGATTGGCAAGCTATATTCCAAATGTGATGTCCAACAGCTTTGGATTGTCGATGTTGAACTCTTATGGAAGGAAACCGTTTGACAGCTCAAGGCCAAGATACGAGCAGTCTTTGGTACGGTGGGCGACACCACAACTCCATGATATCGATGCATTGGCTAAAATGGTTGATCCTGCGCTGGAAGGGCTATACCCGGTTAAGTCGCTGTCCCGTTTTGCCGATGTTATCGCACTTTGTGTTCAGAGGTGCGAACGGGGCGTACTCCCAATGAAACCTATAATTGTCCTTTATGATGAAAGATGCCTCCCATTACAATCCGTGGTGGATTGTAGGGTTGATTAG 1740 0.4592 NWPQNGNDPCGQSWKGISCKDNRVTEIKLPGLQLGGTLGYHDLSNNNLGGSWYQLPPNLQHLNLANNNFNGPIPYSISQMLRLKLPFQQGLTVDFSKLTSLSTLDLSSNSLTGDLPQTMSSLSSLSNPLNVENNHFTGWIPEQLNGIDLQNKVRNSWSSGPAPPPPPGTPPATTSRHHKSGGHGSSSGGSSSDGGKKSGIGAGGVAGIVISILVVGAIVAFFLVKRRSKKSSSLDTEKLDNQPLAPLASNEVHQMNSMQSSSVIDLKTFDTPVEPINVKPPIKPPPLKSFDEEEIPKKPTAVKKTVAAPANVKAYSIADLQIATSSFSVDQLLGEGSFGRVYRAQFDDGKFLRVKKIDSSIIPHDSSNDFVEVVSNISHLHHQNVTRAICLVIVVGKGAHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEIFSQPNSIADSDLNPHLSDCGLASYIPNVMSNSFGLSMLNSYGRKPFDSSRPRYEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQRCERGVLPMKPIIVLYDERCLPLQSVVDCRVD* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0480 579 Gene3D Ribonuclease Inhibitor 1 163 IPR032675 -
Amo10g0480 579 PANTHER OS01G0253100 PROTEIN 479 551 IPR045271 GO:0004714|GO:0006468
Amo10g0480 579 PANTHER OS01G0253100 PROTEIN 2 125 IPR045271 GO:0004714|GO:0006468
Amo10g0480 579 Gene3D Transferase(Phosphotransferase) domain 1 307 519 - -
Amo10g0480 579 ProSitePatterns Protein kinases ATP-binding region signature. 333 356 IPR017441 GO:0005524
Amo10g0480 579 SUPERFAMILY L domain-like 8 151 - -
Amo10g0480 579 PANTHER OS01G0253100 PROTEIN 127 475 IPR045271 GO:0004714|GO:0006468
Amo10g0480 579 Pfam Protein tyrosine and serine/threonine kinase 329 452 IPR001245 GO:0004672|GO:0006468
Amo10g0480 579 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 2 125 - -
Amo10g0480 579 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 479 551 - -
Amo10g0480 579 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 127 475 - -
Amo10g0480 579 MobiDBLite consensus disorder prediction 153 196 - -
Amo10g0480 579 ProSiteProfiles Protein kinase domain profile. 327 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0480 579 SUPERFAMILY Protein kinase-like (PK-like) 307 548 IPR011009 -
Amo10g0480 579 MobiDBLite consensus disorder prediction 173 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0480 Amo-Chr10 4840506 4844762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0480 2 547 Strubbelig Receptor Gene Family AT1G53730 55.906 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Amo10g0480 PK_Tyr_Ser-Thr 3.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0480 - - gmx:100780323 622.083