Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0407 ATGGGCTGGCCCATACTGGGGACTTTGCCCTACATGGGCTCCCTAGCCCATAGAAAACTCGCTGACATGGCCGTTTCGCTAAATGCGAAAAGACTCATGGCAGTGAGTTTAGGATCCCAACCTGTTATCATAAGCAGTCACCCTGACACCGCAAGACAAATTCTATGTGGTTCTAGTTTCTCAGATCGTCCAGTCAAACAATCAGCAAGGTTGCTAATGTTTGAGCGTGCCATAGGATTTGCACCCTATGGCACGTACTGGCACCACCTTCGCAAGGTGGCGGCCACGCACATGTTCTCTCCACGAAGTATTTCCGGCCTAGAGAGTCTCAGGCAAGAAGTGGCCGATGGAATGGTGGAGAGAGCATGGAAGGAGATGGAAGAGAAAGGGGTGGTAGAAGTTAGGGGAATATTGCAAGAAGGGTCTCTTAACAATGTTTTGGAGAGTGTGTTTGGTAGTAATAATAATTCTATGAGTTCAAAAACAAGAGAGGTTTTGGATGAAATGGTTAAAGAAGGGTATGAGTTGATTTCCATGTTCAACTGGGAAGATTATTTCCCTTTTAAGTTCTTAGACTTCTATGGAGTGAAAAGAAGGTGTCAAAAATTGGCGGCTAAGGTCAACACTGTGGTGGGTCAAATTGTTGAAAACAGAAAAAGATCTGAGGATTTTGTTGGACAGAGTGATTTTCTTAGCGCTTTGCTTTCTTTGCCCAAAGAAGAAAGGTTTAGTGATTCGGATATGGTGGCTATTTTGTGGGAAATGATATTCCGGGGAACAGATACAGTTGCTATACTCCTTGAATGGACCATGGCTAGGCTGGTGTTACACCCAGACATACAAACCAAAGCCCGCCAGGAGATCGACAATTGCGTGGGCCCGAACGGTCACGTGCAGGACACGGACATCCCAAATCTCCCTTACCTCCAAGCCATAGTGAAGGAGGTTCTCCGAATGCATCCACCAGGTCCATTGCTCTCATGGGCCCGGCTTGCAATCCATGATGTCCAGATAGACAAAGTTTTAGTGACACGTGGCACAACTGCAATGGTCAACATGTGGGCGATAGCACATGACTCATCTGTATGGGAAGATCCATGGGATTTTAACCCCGAAAGATTCATGAAGGAAGATGTGTCCGTCATGGGATCGGACATGAGGCTCGCACCCTTCGGCGCTGGCCGAAGGGTGTGCCCCGGTAAGGCAATGGGCTTGGCAACGGTTCATCTCTGGCTTGCTAAACTTCTCCACCATTACATATGGGTTCCGGTGCAGCCTGTGGATCTTTCAGAATGCCTCAAGCTCTCTAATGAGATGAAAAACCCTTTAAGGTGCCAAGTGATTTGCAGATAG 1353 0.4738 MGWPILGTLPYMGSLAHRKLADMAVSLNAKRLMAVSLGSQPVIISSHPDTARQILCGSSFSDRPVKQSARLLMFERAIGFAPYGTYWHHLRKVAATHMFSPRSISGLESLRQEVADGMVERAWKEMEEKGVVEVRGILQEGSLNNVLESVFGSNNNSMSSKTREVLDEMVKEGYELISMFNWEDYFPFKFLDFYGVKRRCQKLAAKVNTVVGQIVENRKRSEDFVGQSDFLSALLSLPKEERFSDSDMVAILWEMIFRGTDTVAILLEWTMARLVLHPDIQTKARQEIDNCVGPNGHVQDTDIPNLPYLQAIVKEVLRMHPPGPLLSWARLAIHDVQIDKVLVTRGTTAMVNMWAIAHDSSVWEDPWDFNPERFMKEDVSVMGSDMRLAPFGAGRRVCPGKAMGLATVHLWLAKLLHHYIWVPVQPVDLSECLKLSNEMKNPLRCQVICR* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0407 450 Pfam Cytochrome P450 3 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 1 450 - -
Amo10g0407 450 PRINTS E-class P450 group I signature 26 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS E-class P450 group I signature 247 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS E-class P450 group I signature 267 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS E-class P450 group I signature 310 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS E-class P450 group I signature 352 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS E-class P450 group I signature 388 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS E-class P450 group I signature 398 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PANTHER CYTOCHROME P450 78A7-RELATED 1 450 - -
Amo10g0407 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 391 400 IPR017972 GO:0005506|GO:0016705
Amo10g0407 450 Gene3D Cytochrome P450 1 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 SUPERFAMILY Cytochrome P450 2 450 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS P450 superfamily signature 258 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS P450 superfamily signature 311 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS P450 superfamily signature 389 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo10g0407 450 PRINTS P450 superfamily signature 398 409 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0407 Amo-Chr10 4166514 4168480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0407 2 450 Cytochrome P450 AT1G74110 53.419 1.69e-172 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0407 - - ahf:112715014 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0890 20 14682481 14685157 Amo10g0407 10 4166514 4168480 hybridization