Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0372 ATGGAAGGGGGGAATAGGGCGGAAGCGGAGCGGTGGCTGTACACGGCCAACAAGCTCCTGAGTGCACGTGACCTGCATGGAGCTCGGTCATTTGCCATCAGGGCCCGCGAGTGTGACCCACGCTTTGAAGTCACGGAGCTACTTCTCACCGTAATCGACACCCTCGTGGCCGGCGAGGCCAGGATCAACGACCTCGTTGACTGGTACAGCATTCTCCAGGTTATTCGCTACTCACATAATCTCGACTACATCGCCGCCCAGTACCGCCGTCTCGCTGCCATTCTTGATCCACACCGCAACCCTTTCGCGTTCTCCGCCTACGCCTTCTCCCTCGTCAACGACGCATGGTCGTACTCTCAAACCCTTCCAAGAAAGCAATCTTCGATAACGACCTCAGGCTCCTTACCGAACCTCCTCCTCCTCCCTCCGCTCCTCCGCCCAACCCGCCCTGTTCCTATCGACAATGTGACTCAGCTGACTGAGCCAACTCGGCCGGCTAGGGCTACTGAGTCGATTGAAACCGAGTTGAACGGAGCTTTCTGGATCTGCGTGCCCTTACTGTTACGTGTACCTTGCTGTGCCAGAGCTGCCGGAGGCCTTTTCCATGCGTTGGCGGTGAGGTCGCCGCCGGAGGTTGACCGGGAAAGACGGGTTCATGTCCTTCTGCAGTTGGGGTTTATAGCCGCTAGGGTTTTCTGGTATTTCAAGGATATAAGTGGTTCTGCTTCTCAATGGAACCCTTTCTCTGCTTTGGTTCCTTGTCCTCTCAAAGGTGCTGACAGATGGAGACATCTGAGAGGGCCTTGGGCTTACTATGATGATGAGGCTGCCGCCGCGTTTGTACGAGCATTCCGATACCACGGAAGATTAATAAGGAAGAGTTCTGCCACCACTGCTCGGTGCAATCAAGCACACCAGTGGAAGAGGCTAGGAGAGGTGGTTCGTAACCGTGCTGCGCACATGCTGGATGTGGAAAATGGTGAGGCTGTTGGTGCTGGCTCTGCAGCAGTGCCCATTGCAGCTAGGCTAGAATCTGGCAAGAAAGCTGCATTGGCAAGTTTGAGGAGGAGGGGTGCTGGTAATTTGGGGAAGTTGGATCTGAATGTGGAGTTTAGTAATGATGTGGAGGAGACTGGCCATGGAGTACGCGATAGGGCGAATGCAGGTGGGACGGGTAATGCGGAGGATAACATTGAAGGGATTGGGTTTTTTGAAGGGCTTGATGAGTTCTTGAGCAGCTTGCCTATTCTCAATGCTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1287 0.5431 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARECDPRFEVTELLLTVIDTLVAGEARINDLVDWYSILQVIRYSHNLDYIAAQYRRLAAILDPHRNPFAFSAYAFSLVNDAWSYSQTLPRKQSSITTSGSLPNLLLLPPLLRPTRPVPIDNVTQLTEPTRPARATESIETELNGAFWICVPLLLRVPCCARAAGGLFHALAVRSPPEVDRERRVHVLLQLGFIAARVFWYFKDISGSASQWNPFSALVPCPLKGADRWRHLRGPWAYYDDEAAAAFVRAFRYHGRLIRKSSATTARCNQAHQWKRLGEVVRNRAAHMLDVENGEAVGAGSAAVPIAARLESGKKAALASLRRRGAGNLGKLDLNVEFSNDVEETGHGVRDRANAGGTGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0372 428 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 428 - -
Amo10g0372 428 CDD DnaJ 67 117 IPR001623 -
Amo10g0372 428 SUPERFAMILY Chaperone J-domain 61 117 IPR036869 -
Amo10g0372 428 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0372 Amo-Chr10 3732229 3734188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0372 8 427 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 34.038 1.35e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0372 - - gmx:100811866 369.392