Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0349 ATGAACAAGCGTGTGAGTGATGATGCTATGGCRGAAGTTATAGCAGAAACAAGAAGCGATTCTTCTTCACGTAGACATGGAGGAGGAGATGATGATTTTGTTACTGATCTGCCATATATGCACAGAGTTGGAACTCCTCCTAAGCAGCCACTCTTCCAAGAGATCAAGCATTCTCTCATGGAGACTTTCTTCGCTGACAAGCCCTTTCACAAGTTCAAGGACCAATCTGGATCTAGAAAGTTCGTTCTCGCTCTCCAATCTCTCTTCCCCATTCTTGAATGGGGAAGAGATTACAACCTCAAGAAATTCAGAGGCGATTTCGTTTCCGGACTCACCATTGCAAGTCTTTGCATTCCTCAGGACCTTGCATATGCGAAGCTTGCATATTTGGATCCTTGGTATGGATTATACTCAAGTTTTGTGGCACCTCTTGTGTATGCTTTCATGGGAACCTCAAGAGATATTGCGATTGGACCTGTAGCTGTGGTGTCCCTCTTGCTTGGGAGTTTGCTTTCTAGTGAGATCAGTGACACCAAAAGCCATGACTACGTGCGCCTTGCATTCACTGCTACCTTCTTTGCAGGAGTCACTCAATTGGTACTTGGAGTTTGCAGGCTTGGTTTCTTGATAGATTTCCTATCTCATGCTGCCATTGTGGGCTTCATGGCTGGAGCTGCCATTACTATTGCACTGCAACAGCTTAAAGGTCTGCTTGGCATAAAGAACTTCACCACAAAAACTGATATTGTTTCTGTATTGCATTCGGTTTGGAGTAACGTGCACCATGGGTGGAATTGGGAGACTATACTCATTGGACTATCATTCTTAATCTTCCTTCTTATAACCAAGTATATTGCTAAAAGAAACAAGAAACTCTTTTGGGTATCTGCAATTTCTCCTATGATCTCTGTTGTAGTGTCTACATTTTTTGTGTACATTACCAGAGCAGATGAAAAAGGTGTATCAATTGTGAAGCATATCAAGAGTGGTGTGAATCCATCATCAGCTAACGAAATCTTTTTCAGTGGAAAATATCTAGGCGCTGGTGTTAGAATTGGTATTGTATCTGGCATGGTTGCACTTACGGAAGCTGTAGCAATTGGGAGAACATTTGCTGCAATGAAAGATTATTCACTKGATGGYAACAAAGAAATGGTGGCAATGGGAACAATGAACATTGTTGGTTCTTTGACATCATGCTATGTGACAACAGGATCTTTTTCTCGGTCAGCAGTGAACTTCATGGCTGGTTGTCAAACTGCTGTATCAAACATTGTGATGTCCATTGTTGTGTTACTAACTCTGTTGGTCCTCACACCACTKTTTAAGTACACTCCAAATGCAGTTCTTGCTTCTATTATAATAGCTGCTGTTGTAAACCTGGTGAACATTGARGCAATGGTTCTGCTCTGGAAGATTGACAAATTCGATTTTGTTGCTTGCATGGGAGCATTCTTTGGTGTCATCTTCAAGAGTGTTGAGATTGGCCTTCTAATCGCGGTGGCAATTTCATTTGCCAAGATACTTTTACAAGTGACAAGGCCAAGAACTGCAGTTCTTGGTAAGCTTCCGGGGACTACTGTTTATAGGAACATCCAGCAATACCCCAAAGCAGCACAGATTCCTGGCATGCTCATTATMAGGATTGACTCTGCTATCTACTTCTCAAATTCCAACTATATCAAGGAGAGAATATTGAGATGGTTGATTGAAGAAGAATCTCAAAGGACAGAAAGTGAATTACCGGGAATACAGAATCTCATTGTTGAAATGTCACCTGTTACTGATATTGACACAAGTGGCATCCATGCCTTTGAAGAATTATACAAGACCCTTCAGAAAAGAGAAGTTCAGCTTATATTGGCGAATCCGGGGCCAGTTGTAATAGAAAAGCTCCATGCATCCAAGCTTACAGATCTAATTGGAGAAGATAAAATATTTCTCACAGTGGCTGATGCTGTTGCAACTTTTGATCAAATTCAAGTGTTGATTGAAGCCACGTCCCAATTAATGTATAGAAACAAAATTACATGTTCTGTTTTTCAACTGGTAGTTGTGATTTACAATACAATATACTTTAAGATGAAGCCTTTAGAGACATTATTCACAATCTCAGACAATAATTCCTTAATGAGGAAATATAAGGGAAAAAGCAAAACAAGAAAATTTTGTCTATGCCTCCAATCAATCTTCCCTATCTTAGATTGGGGAAGATATTACACTATCCGAAACTTGAGAGGTGATTTCATTGCTGGACTCACCACTGCAAGTCTCTGCATTCCTCAGGATATTGCATATGCCAAGCTTGCAAATTTGGACCCTCACCATGCACTATACGCAAGCTTTRTGACACCTCTTGTGTATGCTGCCATGGGAAGYTCAAGAGACATTGCTATAGGACCTGCWGCTGTGGTCTCACTCTTGCTTGGAGCTATGCTTTCTCATGACATTAGAGACCACAAGAGCCATGAATATCTACGTCTTGCCTTCACTGCTACATTCTTTGCCGGAGTTACTCAGCTCGCACTCGGCGTTCTTAGGCTCGGTTTCTTGATAGACTTCTTATCTCATGCTGCCATTGTGGGATTCATGAGTGGAGCTGCCATTATTATTTCACTTCAACAGCTTAGAGGCCTCCTTGGCATACCACACTTTACTAAGAAAACTGATATTATTTCTGGCATTGGCTCAGTTAACAACGCTATAGTGCACCATGAGTGGAATTTGGAGACAATTATCATTGGAACATCATGCTTGATCTTCCTTCTTATAACCAAGTAYATTGGTAAAAAGCATAAGAAACTCTTCTGGGTAGCTGCAATTGCTCCTATGACTTGTGTTATAGTTTCCACCATTTGTGTCTACATTACAAGGGCTGATGAGAAAGGCGTATCAACTATTAACCACATCAAGGGAGGTCTTAACTCAGTTTCTGCTAATGAAATTTTCTTTAGAGGAAAATATGTTGTACGAGGTTTTCGGATTGGTGCTGTTGCTGGTATAGTAGCACTCACGGAAGCTGTATCAATTGGGAGAACATTTGCAGCCATGAAACATTATACACTGGATGGTAACAAGGAAATGGTTGCAATGGGAACCATGAACATTGTTGGTTCTTTGACATCTTGCTTTGTGGCCACAGGATCTTTCTCTCGGTCAGCAGTGAACAACATGGCTGGTTGTGAAACTGCAGCATCAAACATAGTTTTGTCCATTGTTGTATTGTTAGTACTRACATTGTTTACACCTGTGTTTAAGTACACTCCAAATGCAGTGCTTTCTTCAATCATAATAGCAGCTACAACAAACTTGGTGAACATAAATGCAGTTATCATGATATGGAAGATTGACAAATTTGACTTCATGGCTTGCATGGGAGCCTTCTTTGGTGTCATATTCATGAATCTTGAATATGCCCTTATAATTGCGGTGTCAATATCTTTTGTGAAAATAGTGTTTAGAGTGACATGGCCAAAGGTTGTAGTACTTGGTAAAATTCCAGGTACTTCTATTTACAGGAACATTGAGCAATACCCTAAGGCATTCCAGATTACTGCCATGCTCATTCTTAGGGTTGATTCTGCTATCTACTTCACTAACTGCAACTTTGTCAAGGACAGAATTCTGAGATGGTTGCGTTATGAAAATGAGGAGAGAGCAGAATGTGAATTAGCCGAAATACAATATGTGGTTGTTGACATGTCAGCTGTTAGCGATATTGACTCGAGTGGCATCAGTTCATTTGAAAGGCTATATCATAGCCTTGAGAAATTACATGTCCAGCTTGTGTTGGCAAACGTGGGGAAGATTGTAATGGAGAAGTTGCAGGAATCCAAGTTAACAGAGTTAATTGGACGAGATAAAATATTCCTCTCAGTTGCTGGTGCTGTTATTACTTATGGTCCCAAGAGGGAAGAACTCTAA 3924 0.4052 MNKRVSDDAMAEVIAETRSDSSSRRHGGGDDDFVTDLPYMHRVGTPPKQPLFQEIKHSLMETFFADKPFHKFKDQSGSRKFVLALQSLFPILEWGRDYNLKKFRGDFVSGLTIASLCIPQDLAYAKLAYLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGSLLSSEISDTKSHDYVRLAFTATFFAGVTQLVLGVCRLGFLIDFLSHAAIVGFMAGAAITIALQQLKGLLGIKNFTTKTDIVSVLHSVWSNVHHGWNWETILIGLSFLIFLLITKYIAKRNKKLFWVSAISPMISVVVSTFFVYITRADEKGVSIVKHIKSGVNPSSANEIFFSGKYLGAGVRIGIVSGMVALTEAVAIGRTFAAMKDYSLDGNKEMVAMGTMNIVGSLTSCYVTTGSFSRSAVNFMAGCQTAVSNIVMSIVVLLTLLVLTPLFKYTPNAVLASIIIAAVVNLVNIEAMVLLWKIDKFDFVACMGAFFGVIFKSVEIGLLIAVAISFAKILLQVTRPRTAVLGKLPGTTVYRNIQQYPKAAQIPGMLIIRIDSAIYFSNSNYIKERILRWLIEEESQRTESELPGIQNLIVEMSPVTDIDTSGIHAFEELYKTLQKREVQLILANPGPVVIEKLHASKLTDLIGEDKIFLTVADAVATFDQIQVLIEATSQLMYRNKITCSVFQLVVVIYNTIYFKMKPLETLFTISDNNSLMRKYKGKSKTRKFCLCLQSIFPILDWGRYYTIRNLRGDFIAGLTTASLCIPQDIAYAKLANLDPHHALYASFXTPLVYAAMGSSRDIAIGPAAVVSLLLGAMLSHDIRDHKSHEYLRLAFTATFFAGVTQLALGVLRLGFLIDFLSHAAIVGFMSGAAIIISLQQLRGLLGIPHFTKKTDIISGIGSVNNAIVHHEWNLETIIIGTSCLIFLLITKYIGKKHKKLFWVAAIAPMTCVIVSTICVYITRADEKGVSTINHIKGGLNSVSANEIFFRGKYVVRGFRIGAVAGIVALTEAVSIGRTFAAMKHYTLDGNKEMVAMGTMNIVGSLTSCFVATGSFSRSAVNNMAGCETAASNIVLSIVVLLVLTLFTPVFKYTPNAVLSSIIIAATTNLVNINAVIMIWKIDKFDFMACMGAFFGVIFMNLEYALIIAVSISFVKIVFRVTWPKVVVLGKIPGTSIYRNIEQYPKAFQITAMLILRVDSAIYFTNCNFVKDRILRWLRYENEERAECELAEIQYVVVDMSAVSDIDSSGISSFERLYHSLEKLHVQLVLANVGKIVMEKLQESKLTELIGRDKIFLSVAGAVITYGPKREEL* 1308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0349 1307 Gene3D STAS domain 1157 1301 IPR036513 -
Amo10g0349 1307 Gene3D STAS domain 514 660 IPR036513 -
Amo10g0349 1307 MobiDBLite consensus disorder prediction 12 33 - -
Amo10g0349 1307 CDD STAS_SulP_like_sulfate_transporter 1178 1293 - -
Amo10g0349 1307 SUPERFAMILY SpoIIaa-like 536 658 IPR036513 -
Amo10g0349 1307 CDD STAS_SulP_like_sulfate_transporter 535 650 - -
Amo10g0349 1307 PANTHER SULFATE TRANSPORTER 709 1304 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo10g0349 1307 PANTHER SULFATE TRANSPORTER 19 658 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo10g0349 1307 ProSitePatterns SLC26A transporters signature. 132 153 IPR018045 GO:0008271|GO:0008272
Amo10g0349 1307 ProSiteProfiles STAS domain profile. 534 657 IPR002645 -
Amo10g0349 1307 TIGRFAM sulP: sulfate permease 732 1296 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo10g0349 1307 TIGRFAM sulP: sulfate permease 90 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Amo10g0349 1307 Pfam Sulfate permease family 103 482 IPR011547 GO:0016021
Amo10g0349 1307 Pfam Sulfate permease family 745 1125 IPR011547 GO:0016021
Amo10g0349 1307 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 709 1304 - -
Amo10g0349 1307 PANTHER HIGH AFFINITY SULFATE TRANSPORTER 19 658 - -
Amo10g0349 1307 Pfam STAS domain 535 653 IPR002645 -
Amo10g0349 1307 Pfam STAS domain 1179 1296 IPR002645 -
Amo10g0349 1307 ProSiteProfiles STAS domain profile. 1177 1300 IPR002645 -
Amo10g0349 1307 SUPERFAMILY SpoIIaa-like 1183 1297 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0349 Amo-Chr10 3507729 3516338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0349 22 654 Inorganic Solute Cotransporters AT1G22150 72.050 0.0 924
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0349 K17470 - gmx:100784124 1035.4