Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0344 ATGGCAGCTGCAACATCTGGTGCTGTGTTGAACGGTTTGGGATCTTCTTTCCTTTGTGGAGGAAAGAGGAGCCAGACACTACTTGCTAATGCTATTGCAGGCAAAGCTGGTGCTTATGTTAGTCCTAAAAGATATGTTGTAGCTGCTGCTGCTGCGCCAAAGAAATCATGGGTCCCTGGTGTTAGAGGTGGTGGAAACTTCATTGACCCTGAATGGCTTGACGGCTCGCTACCTGGTGACTATGGTTTTGACCCACTAGGGCTAGGGAAGGACCCAGCATTCCTGAAATGGTACAGAGAAGCTGAACTCATTCATGGAAGGTGGGCAATGGCTGCAGTTGTGGGAATCTTTGTTGGCCAGGCATGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGTTCACTACTGGGCACTCAGTTGCTTCTCATGGGTTGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCCTGATTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCGGAGAACTTTGCCAATGCCACCGGTGATCAAGGCTACCCTGGTGGCAAATTCTTTGACCCTTTGGGACTTGCTGGCACCATCAAGGATGGCGTTTACATTCCAGACAGAGAGAAGCTTGAAAGGCTCAAATTGGCTGAAATTAAGCATGCAAGGATTGCCATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGTCAAGGGAAGACTCCCCTTGGTGCTCTTGGCTTGTAA 777 0.4968 MAAATSGAVLNGLGSSFLCGGKRSQTLLANAIAGKAGAYVSPKRYVVAAAAAPKKSWVPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0344 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Amo10g0344 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Amo10g0344 258 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 1 258 - -
Amo10g0344 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 258 IPR001344 GO:0009765|GO:0016020
Amo10g0344 258 SUPERFAMILY Chlorophyll a-b binding protein 69 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0344 Amo-Chr10 3490750 3492503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0344 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 83.784 2.88e-155 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0344 K08917 - gmx:100500118 494.197