Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0330 ATGGCCATGGCGACGGAGGAAGGGGATCCGGAGAGAGGTGATATCAATGGCGGACACTCCATGGAATCAACCGAATCCAGGTGGGTTTTTCAGGGGGACGAGGAGGATAACTCCGACATAGAAGAATTCAACGCCGATTTGAGACACCATCACACCCGTCGCTACGCTTCCGTGCTTGATTCTGACGATGAGGACATTGGTGAGCAGAGACTCATTCGAACTGGACCTCGAATTGATTCCTTCGACGTCGAGGCTCTTGATGTCCCCGGTGCTCACAGAACTGACTATGAGGATATCAGTATGGGAAAGAAAATCGTGCTGGCTTTTCAGACTCTTGGCGTTGTCTTTGGTGATGTGGGAACAAGTCCATTATATACCTTTAGTGTCATGTTTAGAAAGGCACCCATCAATGGAGATGAGGACATTCTTGGAGCATTATCACTTGTGTTGTACACTTTAATCCTGATTCCCTTATTGAAGTATGTGCTGGTCGTTCTGTGGGCCAATGATGATGGTGAAGGTGGTACTTTTGCCTTGTACTCATTGATATGTCGTCATGCTAAAGTGAGCCTTCTCCCCAATCAATTACCATCAGATGCCCGTATATCAAGCTTTAGACTAAAGGTCCCATCTGCTGAGCTTGAAAGGTCCCTAAAAATCAAGGAAAGACTTGAGAGTTCTTTGACTCTGAAGAAGATTCTACTAATATTAGTGCTTGCTGGTACTTCTATGGTGATTGCTAATGGGGTTGTTACACCAGCAATGTCAGTACTTTCCTCTGTTGGTGGTTTAAAAGTTGGGGTAGATGCAATCGAGCAAGATGAAGTGGTGATGATTTCAGTTGCATCCCTTATAATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGACTTTTAGTAGGACCTGCTTTGTTCATATGGTTTTGTTCTCTTGCTGGAATTGGGATCTACAATCTTCTCAAATATGATACTGGTGTCTTGAAGGCATTTAATCCTATTCACATCTACTATTTTTTCAAGAGGAACTCAACTAAAGCATGGTATTCTCTTGGGGGTTGTCTCCTTTGTGCTACTGGTTCAGAGGCCATGTTTGCAGATCTTTGCTACTTTTCTGTACAATCAGTTCAGCTTTCTTTTGTCTTTCTTGTTTTGCCGTGCCTAGTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCGAGCCTTTTTCTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACCTTCCTCATTGCAAACGTTGCTGCACTAATTGCAAGTCGGACTATGACAACAGCAACATTTTCATGCATAAAACAATCAACAGCACTTGGTTGTTTCCCTCGTCTTAAGATCGTTCATACCTCCCGGAAATTTATGGGCCAGATCTATATTCCTGTCCTAAACTGGTTTCTCTTGGCTGTTTCTCTGGTTTTGGTCTGCACTATATCCAGCATTGATGAGATTGGAAATGCTTATGGTATTGCGGAGCTTGGAGTGATGATGATGACCACTATTTTAGTAACCCTTGTTATGCTTCTTATATGGCAAATACACATCATCATAGTGCTGACATTTGTGGTATTCTTCTTGGGATTGGAGTTGATTTTCTTCTCATCTGTTTTGGGGAGTGTGGCAGATGGAAGTTGGATTATATTGGTCCTTGCTGTGATAATGTTTTTTATCATGTATGTTTGGAATTATGGAAGCAAGCTCAAGTATGAAACTGAAGTCAAACAAAAGCTGTCAATGGATTTGATGCGAGAATTAGGTAGCAATCTAGGCACAATACGGGCTCCTGGAATTGGTCTTCTCTATAATGAGTTAGTCAAAGGAATCCCAGGAGTTTTTGGCCATTTTTTGACTACGCTTCCAGCAATACACTCCATGATCATTTTTGTGAGTATTAAGTATGTTCCTGTTTCTGTGGTGCCTCAAAGTGAAAGGTTCCTTTTCCGGAGAGTCTGCCCAAAAAGCTATCATATATTCCGTTGTATTGCCAGGTATGGTTATAAGGATGTCCGTAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATTGAAAGCCTAGAAAAATTTATACGACGTGAGGCTCAAGAGAGGTCACTGGAGAGTGATGGGGATGAAGATTCTGACTCAGAGGAAGGGCACTATGATTCCAGGGTTCTTGTAGCTCCCAATGGGAGTGTTTACTCACTTGGGGTTCCTCTTCTGGCTGGTCATAAGGACACAAAAAAGCTCACTTTAGAAGCAAGCACTTCAGAGGAGGTAACCCCGGCACTTGATGCTGAGCAGAGCCTTGAGTGGGAGTTATCTTTTATTCACAAGGCTAAAGAATCTGGAGTTGTTTATCTTCTTGGTCATGGGGATATAAGGGCAAGGAAGGACTCATGGTTTATCAAGAAGCTTGTAATAAACTACTTCTATGCATTTTTGAGAAGGAACAGCAGGAGGGGTATCACGACTTTAACTGTACCTCACTCAAATCTGATGCAAGTTGGCATGACTTACATGGTTTGA 2544 0.4265 MAMATEEGDPERGDINGGHSMESTESRWVFQGDEEDNSDIEEFNADLRHHHTRRYASVLDSDDEDIGEQRLIRTGPRIDSFDVEALDVPGAHRTDYEDISMGKKIVLAFQTLGVVFGDVGTSPLYTFSVMFRKAPINGDEDILGALSLVLYTLILIPLLKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDARISSFRLKVPSAELERSLKIKERLESSLTLKKILLILVLAGTSMVIANGVVTPAMSVLSSVGGLKVGVDAIEQDEVVMISVASLIILFSVQKYGTSKVGLLVGPALFIWFCSLAGIGIYNLLKYDTGVLKAFNPIHIYYFFKRNSTKAWYSLGGCLLCATGSEAMFADLCYFSVQSVQLSFVFLVLPCLVLGYLGQAAYLMENHADAGRAFFSSVPSGAFWPTFLIANVAALIASRTMTTATFSCIKQSTALGCFPRLKIVHTSRKFMGQIYIPVLNWFLLAVSLVLVCTISSIDEIGNAYGIAELGVMMMTTILVTLVMLLIWQIHIIIVLTFVVFFLGLELIFFSSVLGSVADGSWIILVLAVIMFFIMYVWNYGSKLKYETEVKQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPGVFGHFLTTLPAIHSMIIFVSIKYVPVSVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDEDSDSEEGHYDSRVLVAPNGSVYSLGVPLLAGHKDTKKLTLEASTSEEVTPALDAEQSLEWELSFIHKAKESGVVYLLGHGDIRARKDSWFIKKLVINYFYAFLRRNSRRGITTLTVPHSNLMQVGMTYMV* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0330 847 PANTHER POTASSIUM TRANSPORTER 19 846 - -
Amo10g0330 847 MobiDBLite consensus disorder prediction 1 35 - -
Amo10g0330 847 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 846 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo10g0330 847 Pfam K+ potassium transporter 108 681 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo10g0330 847 TIGRFAM kup: potassium uptake protein 107 847 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0330 Amo-Chr10 3348410 3354247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0330 6 847 Inorganic Solute Cotransporters AT5G09400 76.788 0.0 1292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0330 - - gmx:100788190 1387.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0576 20 7317190 7323656 Amo10g0330 10 3348410 3354247 hybridization
Amo13g3896 13 130707702 130722183 Amo10g0330 10 3348410 3354247 PCT
Amo10g0330 10 3348410 3354247 Amo13g3896 13 130707702 130722183 PCT