Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0329 ATGGAATCTGCTTTGTGCCTCAACATGCCGATGCAGATACAGATGAGTTTAAAGCCACTCTTCAAACCTCTCAACCGTCAATTCGCCACGTGGACGATTCAATCAGCAGCGAAACAGAAGCCATCACTCGTCTTCCGCTTCAACCACTCGTCTCAGCTGCCTCCTCTACGCTGCGTTTCCAGCTCAGCTGGTGGTGGTGACATTCCCTCCGATGCTATTGTTCTCAACGTTGAGGGTATGATGTGCGACGGCTGCGCCAATAACGTCAGGAAGCTTCTAGAAAGCCGACCACAAGTGTCATCTGCTACTGTGAATCTAACCGCCGCTAAAGCAGTAGTGTCTGCCGTATCCGAAGAAAAAGGTTCCCCCAACTGGCAGAAGCAATTAGGAGAAGCACTTGCTCAGCATTTAACTAACTGCGGTTTCAATTCTACCTTTCAAGGCGAGTGA 450 0.4978 MESALCLNMPMQIQMSLKPLFKPLNRQFATWTIQSAAKQKPSLVFRFNHSSQLPPLRCVSSSAGGGDIPSDAIVLNVEGMMCDGCANNVRKLLESRPQVSSATVNLTAAKAVVSAVSEEKGSPNWQKQLGEALAQHLTNCGFNSTFQGE* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0329 149 Pfam Heavy-metal-associated domain 74 120 IPR006121 GO:0046872
Amo10g0329 149 CDD HMA 74 142 IPR006121 GO:0046872
Amo10g0329 149 Gene3D - 71 148 - -
Amo10g0329 149 ProSitePatterns Heavy-metal-associated domain. 77 106 IPR017969 GO:0046872
Amo10g0329 149 PANTHER ATP7, ISOFORM B 63 145 - -
Amo10g0329 149 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 63 145 - -
Amo10g0329 149 SUPERFAMILY HMA, heavy metal-associated domain 73 118 IPR036163 GO:0046872
Amo10g0329 149 ProSiteProfiles Heavy-metal-associated domain profile. 72 146 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0329 Amo-Chr10 3347255 3348346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0329 65 145 Primary Pumps ATPases AT4G33520 59.756 6.58e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0329 - K17686 adu:107468605 297.745