Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0297 ATGGAGGTGCAGTTGCAGAGCGATCCATGGGAGTGGGAGAAGCCAATGGCCACTTATCTGCTCCGCTACCACTCCGACCAGCTCCGATCCATCGCTTCCTCTCCCGATCCCAATCTTCACTATCCTCTCTTCATTGACTTCGCAGAGTTGATGGAGGAAGATCCTCACCTTGCGCGTCTCATATTCTCCCAACCCACCCCTTACTTGCAAGCCTTCGACAATGCTGCTCTCTTGTCTCATAGAATTGTGGTGAGAGATTTAGAGCAAGAGAAGAATGTTGTTGAGAAAAATTTCATTCATGTTCGAATTAACATCAGTGGTTCTCCCCTTGAATGCTCTGAGACGTTTCCGACCATAGGGCGTGTTCGAGTGCAGCATCGCGGAATTCTTCTCACTGTGAAAGGGACTGTAATCAGGTCTGGAGCAATCAAGATGCATGAAGGAGAGAGGAAGTATATGTGCAACCAATGCAAGAAGAGCTTCACAGTTTATCCTGAGGTTGAAGCTCGAAACTCCATATCATTACCTTCAATTTGCCCCATGCAGAAATTGAAGCCCTGTGGAGGCACAAAATTTCAGTATGTAGAAAATACTGTAGTATGCCATGATTATCAGGAGATAAAAATCCAAGAAAGTACACAGGTGCTAGGTGTTGGGGCCATTCCTCGTTCAATTCTTGTCATCTTGCATGATGATCTGGTTGATGTTGTTAAAGCTGGAGATGATGTGATTGTCACTGGTCTCTTGACTGCAAAATGGTCTCCAGAGTTGAAAGATGTGCGCTGTGACCTTGATCCTGTATTAATAGCCAACAGTGTAAGGAGGACCAATCAATTGAAGTCAGAAATGGACATTTCTGATGACTTAGTTACAAAATTCAAGCAGTTCTGGGACCATTTCAAAGATGCACCCTTAAAAGGGAGGAATGCTATTCTTCGAGGAATTTGCCCACAAGTATTTGGCCTGTTTACTGTCAAGCTGGCCGTTGCATTAACACTTATAGGAGGTGTTCAACATGTCGATGCTTCTGGAACAAGGGTAAGAGGGGAATCCCACTTACTCTTGGTTGGTGATCCCGGCACTGGAAAGTCTCAGTTTCTGAAATTTGCAGCGAAATTGAGCAATAGATCTGTTATTACCACTGGGCTGGGAAGCACAAGTGCTGGATTGACGGTTACTGCAGTCAAGGATGGAGGCAAATTTCCATACATCAATTTTTACTGA 1224 0.4477 MEVQLQSDPWEWEKPMATYLLRYHSDQLRSIASSPDPNLHYPLFIDFAELMEEDPHLARLIFSQPTPYLQAFDNAALLSHRIVVRDLEQEKNVVEKNFIHVRINISGSPLECSETFPTIGRVRVQHRGILLTVKGTVIRSGAIKMHEGERKYMCNQCKKSFTVYPEVEARNSISLPSICPMQKLKPCGGTKFQYVENTVVCHDYQEIKIQESTQVLGVGAIPRSILVILHDDLVDVVKAGDDVIVTGLLTAKWSPELKDVRCDLDPVLIANSVRRTNQLKSEMDISDDLVTKFKQFWDHFKDAPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTRVRGESHLLLVGDPGTGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGKFPYINFY* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0297 407 Gene3D - 281 403 IPR027417 -
Amo10g0297 407 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 34 401 IPR031327 GO:0003677|GO:0005524|GO:0032508
Amo10g0297 407 SUPERFAMILY Nucleic acid-binding proteins 40 258 IPR012340 -
Amo10g0297 407 Gene3D - 146 202 - -
Amo10g0297 407 ProSiteProfiles MCM family domain profile. 307 397 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo10g0297 407 PANTHER DNA HELICASE MCM9 34 401 - -
Amo10g0297 407 Pfam MCM P-loop domain 309 398 IPR001208 GO:0003677|GO:0005524|GO:0032508
Amo10g0297 407 Pfam MCM OB domain 122 250 IPR033762 -
Amo10g0297 407 SMART mcm 115 406 IPR031327 GO:0003677|GO:0005524|GO:0032508
Amo10g0297 407 Gene3D - 122 250 IPR012340 -
Amo10g0297 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 388 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0297 Amo-Chr10 3003939 3008207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0297 16 401 Core DNA Replication Machinery Family AT2G14050 71.465 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0297 K10738 - gmx:100776255 665.611