Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0296 ATGGAGAGCTTTGCGCTGCACTCGCTCTCCACCTCAACCTCTTTCTCACTCTCATCTTCACGCTTCTCCCTTCACCACCGTTCTCGACCCATCATGACAAACAGATCCCAACTCTCACTTCCACTGAATCCACAACCACGCTCAAACCCATCTCCCAAATCACCCCTCATTTCTCAAGTTTTCTCCTTTCCCTCCAAAGCTTCAAAATTTAACACTTCTTCAAGACCCCATTACAATCCACTTCATGCTTCTTCATCTTCCTCAAATTCTCCGTCACCACCGCCACCGCCACTGCAGGGTGCAAAGCCCATTCCTTTCGTAATCTCCGTATGCATAGGCCTCATTGTTCGTTTCTTAGTTCCCAAGCCAGTGGAAGTTACTCCAGAGGCATGGCAATTGCTCTCAATTTTCCTCTCAACCATCGCGGGCCTTGTCCTGAGCCCGTTGCCCGTTGGAGCCTGGGCTTTTCTGGGCCTTACAACTGCTGTGGTAACCAAAACTTTAACCTTTGGTGCAGCCTTCAGTGCCTTCACCAACGAAGTGATTTGGTTGATTGTGATTTCATTCTTCTTTGCCCGTGGATTTGTGAAAACTGGTTTGGGAGATAGAATTGCAACTTACTTTGTGAAGTGGATGGGGAAGAGCACTTTGGGTTTGTCTTATGGTTTGACATTCAGTGAAGTGCTTATTGCTCCGGCAATGCCGAGCACCACCGCAAGAGCTGGTGGTGTGTTCTTGCCGATCATCAAGTCACTGTCACTCTCCGCTGGCAGTGAACCTGGCAATCCTACTGCTAAGAGGCTTGGTGCTTATCTCGTTCAGAACCAGTTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAATCTGCTGTGTATCAAATTAGCAGAGGAGCTTGGGGTCATTGTTTCTAGCCCTTGGGTTACTTGGTTCAAGGCAGCTAGCTTACCTGCACTTGTTTGTCTTCTTGTTACACCGTTGGTTTTATACAAGCTCTATCCCCCTGAAATTAAAGACACACCGGAAGCACCTGCCCTGGCTGCAAAGAAACTCGAAACTATGGGCCCTGTCACAAAAAATGAATGGATTATGGTTTCTACGATGCTTCTTGCCGTCTCTTTGTGGATCTTTGGAGATAGTCTCGGCATAGCAAGTGCTGTAGCTGCGATGATTGGGTTATCAATACTACTTGTATTAGGAGTTCTTGACTGGAATGACTGCTTGAATGAGAAATCGGCTTGGGATACCTTGGCTTGGTTTGCCATTCTTGTGGGCATGGCAGGCCAGTTGACAAACCTTGGTATCGTAACCTGGATGTCTGATTGTGTAGCCAACTCGCTTCGGTCATTCTCTTTGAGCTGGCCAGCTTCACTAGCTGTTCTTCAGGCAGCTTATTTCTTAATCCACTACCTTTTCGCCAGTCAGACAGGACACGTGGGGGCTTTATACTCTGCATTTCTTGCTATGCATAGGGCAGCTGGTGTTCCTGGTGTTCTGGCTGCGCTCGCTTTAGGTTACAACACAAATCTTTTTGGTGCAATAACACACTATAGTAGCGGTCAGGCTGCTGTATACTTTGGAGCTGGTTATATCGACCTTCCTGATATATTCAAAATGGGGTTCGTTATGTTTGTTATCAATGCTATCATCTGGGGAGGTGTTGGCGCTTTCTGGTGGAAATTTTTGGGACTGTATTGA 1713 0.4711 MESFALHSLSTSTSFSLSSSRFSLHHRSRPIMTNRSQLSLPLNPQPRSNPSPKSPLISQVFSFPSKASKFNTSSRPHYNPLHASSSSSNSPSPPPPPLQGAKPIPFVISVCIGLIVRFLVPKPVEVTPEAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTTAVVTKTLTFGAAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTLGLSYGLTFSEVLIAPAMPSTTARAGGVFLPIIKSLSLSAGSEPGNPTAKRLGAYLVQNQFQSAGNSSALFLTAAAQNLLCIKLAEELGVIVSSPWVTWFKAASLPALVCLLVTPLVLYKLYPPEIKDTPEAPALAAKKLETMGPVTKNEWIMVSTMLLAVSLWIFGDSLGIASAVAAMIGLSILLVLGVLDWNDCLNEKSAWDTLAWFAILVGMAGQLTNLGIVTWMSDCVANSLRSFSLSWPASLAVLQAAYFLIHYLFASQTGHVGALYSAFLAMHRAAGVPGVLAALALGYNTNLFGAITHYSSGQAAVYFGAGYIDLPDIFKMGFVMFVINAIIWGGVGAFWWKFLGLY* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0296 570 Pfam Sodium:sulfate symporter transmembrane region 107 569 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo10g0296 570 MobiDBLite consensus disorder prediction 28 44 - -
Amo10g0296 570 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 122 564 IPR001898 GO:0016020|GO:0022857|GO:0055085
Amo10g0296 570 MobiDBLite consensus disorder prediction 28 56 - -
Amo10g0296 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 67 570 IPR030676 -
Amo10g0296 570 MobiDBLite consensus disorder prediction 71 97 - -
Amo10g0296 570 PANTHER DICARBOXYLIC ACID TRANSPORTER2 67 570 - -
Amo10g0296 570 MobiDBLite consensus disorder prediction 71 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0296 Amo-Chr10 2997113 3000386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0296 1 570 Antiporters AT5G64290 73.427 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0296 - - aip:107623523 1063.91