Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0289 ATGGTTAAGGATCATATGCCTTGGCCTTGCTCACAGCATATGGCTGGGTCATCACCTTGCTTGAATTGCTCCGGCACATTGCCAGGGCCAAACTTGTATGGTTCTTCAGCATATCTGAATCCTAGTACATTCATCTTGCCTGCTGTGAGTGTATTTCCTGGATTTGCAGCTCCTGCTGCCCCATATCTGAAGGCTGAGCCCACCAATGAAGTAGTGCAGGGGTTCCATCAGTATCTTCAGTCATTGCCAACTTTGAAAGAAATGCATACTGAAGAGGCTATGCAACTGCAAAATGCAAATTCTGTATCTTTGCAGAAGAAGTTACTTATTTTCGACCAATCTGGTAATAAGACAAGGTTGTTTTATGGTTCTGTCTTGCCTCTTGTCCAGAGTCCAGTTGTTAATGCTACACAATATGTATACAAGGACGAAAAGGCAGCTAATTTGGGTCAAAAGCATCTACCGAACAGTTCAACAGAAGAATCTGATAATGATCATATAGTTAATGAAGAAAGTGAAATGCATGAAGACACAGAAGAAATCAATGCCTTGCTTTATTCTGATGATTCTGATTTCAGTGGTGATGATGATGATGAGGTAACAAGTACAGGCCACTCTCCATTGGTTACTAAAATGACTTATGTGATGCAAGAGCAGTATGAGGATTCAAAGGAGGAGGTTGCAAGCTCTGGTTTGCCAAACAAAAGGCGGAAGTCAATTAATGGCGAGTACTATAGATCACCGATGCCTGCAGGTACTGCAGGTTTAGCAAGACTAAATGATACTTATGAGTATGCCAGCGACGCTGAATCAAAATATTCCAGTGGCCGTGTGTATTCTGGAGGTGCTGAGCAAACTAAAGACAATAGTTCAATGGTGGATGATATTCAATTGAAAAGGGATAAAATCCGGGAATCATTGAGAGTACTTGAGAACTTAGTTCCTGGTGCAAAGGGAAAGAATCCACTGTTAGTCATTGATGAAACAATTGAGTACTTGAATTCTTTGATGACTGGTACTTCTGGAGAAGATAATATCACCAAAGGCTCATCGCCGCCATAG 1062 0.4153 MVKDHMPWPCSQHMAGSSPCLNCSGTLPGPNLYGSSAYLNPSTFILPAVSVFPGFAAPAAPYLKAEPTNEVVQGFHQYLQSLPTLKEMHTEEAMQLQNANSVSLQKKLLIFDQSGNKTRLFYGSVLPLVQSPVVNATQYVYKDEKAANLGQKHLPNSSTEESDNDHIVNEESEMHEDTEEINALLYSDDSDFSGDDDDEVTSTGHSPLVTKMTYVMQEQYEDSKEEVASSGLPNKRRKSINGEYYRSPMPAGTAGLARLNDTYEYASDAESKYSSGRVYSGGAEQTKDNSSMVDDIQLKRDKIRESLRVLENLVPGAKGKNPLLVIDETIEYLNSLMTGTSGEDNITKGSSPP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0289 353 PANTHER TRANSCRIPTION FACTOR SAC51 7 338 - -
Amo10g0289 353 MobiDBLite consensus disorder prediction 278 292 - -
Amo10g0289 353 MobiDBLite consensus disorder prediction 222 245 - -
Amo10g0289 353 Coils Coil 293 313 - -
Amo10g0289 353 MobiDBLite consensus disorder prediction 270 292 - -
Amo10g0289 353 PANTHER TRANSCRIPTION FACTOR BHLH145 7 338 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0289 Amo-Chr10 2929396 2933046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0289 103 336 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 36.735 1.30e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0289 - - adu:107468645 700.279