Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0281 ATGGAAGGGGGGAATAGGGCGGAAGCGGAGCGGTGGCTGTACACGGCCAACAAGCTCCTGAGTGCACGTGACCTGCATGGAGCTCGGTCATTTGCCATCAGGGCCCGCGAGTGTGACCCACGCTTTGAAGTCACGGAGCTACTTCTCACCGTAATCGACACCCTCGTGGCCGGCGAGGCCAGGATCAACGACCTCGTTGACTGGTACAGCATTCTCCAGGTTATTCGCTACTCACATAATCTCGACTACATCGCCGCCCAGTACCGCCGTCTCGCTGCCATTCTTGATCCACACCGCAACCCTTTCGCGTTCTCCGCCTACGCCTTCTCCCTCGTCAACGACGCATGGTCCGTACTCTCAAACCCTTCCAAGAAAGCAATCTTCGATAACGACCTCAGGCTCCTTACCGAACCTCCTCCTCCTCCTCCGCCTCCTCCGCCCCAACCCGCCCCTGTTCCTATCGACAATGTGACTCAGCTGACTGAGCCAACTCGGCCGGCTAGGGCTACTGAGTCGATTGAAACCGAGTTGAACGGAGCTTTCTGGACTGCGTGCCCTTACTGTTACGGTTTGTTTGAGTATCCGAAGGTGTACGAGGAGTGTACCTTGCTGTGCCAGAGCTGCCGGAGGCCTTTCCATGCGTTGGCGGTGAGGTCGCCGCCGGAGTTGACCGGGAAAGACGGGTTCATGTCCTTCTGCAGTTGGGGTTTTATGCCGCTAGGGTTTTCTGGTGATTTCAAGGATATAAGTGGTTCTGCTTCTCAATGGAACCCTTTCTCTGCTTTGGTTCCTTGTCCTCTCAAAGGTGCTGACAGATGGAGACATCTGAGAGGGCCTTGGGCTTACTATGATGATGAGGCTGCCGCCGCGTTTGTCGAGCATTCCGATACCACGGAAGATGATTCTGATGATGATGATTGGAGGAATATTAATGCGAATAAGAAGGTGGGGAGGAAAAGAAGAAGAAGAAGGAATAGGAAGAGTTCTGCCACCACTGCTGGTGGCAATGCAAGCACACCAGTGGAGAGGCCTAGGAGAGGGGTTCGTAACCGTGCTGGCAATGCTGGTGTGGAAAATGGTGAGGCTGTTGGTGCTGGCTCTGCAGCAGTGCCCATTGCAGCTAGGCTAGAATCTGGCAAGAAAGCTGCATTGGCAAGTTTGAGGAGGAGGGGTGCTGGTAATTTGGGGAAGTTGGATCTGAATGTGGAGTTTAGTAATGATGTGGAGGAGACTGGCCATGGAGTACGCGATAGGGCGAATGCAGGTGGGACGGGTAATGCGGAGGATAACATTGAAGGGATTGGGTTCTTTGAAGGGCTTGATGAGTTCTTGAGCAGCTTGCCTATTCTCAATGCTGTTGCAGATGATAAGGTTAAGGGTCATTAG 1386 0.5382 MEGGNRAEAERWLYTANKLLSARDLHGARSFAIRARECDPRFEVTELLLTVIDTLVAGEARINDLVDWYSILQVIRYSHNLDYIAAQYRRLAAILDPHRNPFAFSAYAFSLVNDAWSVLSNPSKKAIFDNDLRLLTEPPPPPPPPPPQPAPVPIDNVTQLTEPTRPARATESIETELNGAFWTACPYCYGLFEYPKVYEECTLLCQSCRRPFHALAVRSPPELTGKDGFMSFCSWGFMPLGFSGDFKDISGSASQWNPFSALVPCPLKGADRWRHLRGPWAYYDDEAAAAFVEHSDTTEDDSDDDDWRNINANKKVGRKRRRRRNRKSSATTAGGNASTPVERPRRGVRNRAGNAGVENGEAVGAGSAAVPIAARLESGKKAALASLRRRGAGNLGKLDLNVEFSNDVEETGHGVRDRANAGGTGNAEDNIEGIGFFEGLDEFLSSLPILNAVADDKVKGH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0281 461 MobiDBLite consensus disorder prediction 314 328 - -
Amo10g0281 461 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Amo10g0281 461 Pfam DnaJ domain 67 129 IPR001623 -
Amo10g0281 461 MobiDBLite consensus disorder prediction 135 153 - -
Amo10g0281 461 MobiDBLite consensus disorder prediction 294 359 - -
Amo10g0281 461 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 461 - -
Amo10g0281 461 SMART dnaj_3 66 124 IPR001623 -
Amo10g0281 461 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 461 - -
Amo10g0281 461 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Amo10g0281 461 CDD DnaJ 67 121 IPR001623 -
Amo10g0281 461 Gene3D DnaJ domain 63 133 IPR036869 -
Amo10g0281 461 SUPERFAMILY Chaperone J-domain 61 132 IPR036869 -
Amo10g0281 461 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0281 Amo-Chr10 2855863 2857812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0281 8 460 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 41.064 5.89e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0281 - - aip:107623843 557.755