Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0187 ATGAGGAAGAAGTGTGAGCTGTGTAACTGTGCTGCAAACTTGTTCTGTGATTCAGATCAAGCAAGCCTTTGTTGGGAATGTGATGCAAAGGTTCACAGTGCAAACTTTCTGGTCACAAAGCATCCAAGGATTCTTCTATGCCATGTTTGTCAGTCACTAACACCTTGGCATGGTTCAGGTCCCAAGTTTGTTCCCACCATGTCACTTTGCACTGATTGTGTCACCAAAAACAATGATACCTGCAACCACCAGAATGATGATGACGACTATGATGATGTAGAAAATGATGGTGTTGATGGTGGTGAGGATGAAGATGAAGATGAAGATGAAGAAGAAGAAAATCAAGTGGTTCCATGGACATCATCAACATCAATGCCTCCACCACCAGTTTCCTCTTCTTCAAATAGTGCAACCACTTCCACCAGATTCTCTAATGATGCTGAAGAAGAAGCAATCTCCAACTGA 465 0.4258 MRKKCELCNCAANLFCDSDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTPWHGSGPKFVPTMSLCTDCVTKNNDTCNHQNDDDDYDDVENDGVDGGEDEDEDEDEEEENQVVPWTSSTSMPPPPVSSSSNSATTSTRFSNDAEEEAISN* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0187 154 MobiDBLite consensus disorder prediction 116 154 - -
Amo10g0187 154 CDD Bbox1_BBX-like 4 46 - -
Amo10g0187 154 MobiDBLite consensus disorder prediction 85 115 - -
Amo10g0187 154 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 3 148 - -
Amo10g0187 154 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 148 - -
Amo10g0187 154 SMART bboxneu5 1 46 IPR000315 GO:0008270
Amo10g0187 154 MobiDBLite consensus disorder prediction 79 154 - -
Amo10g0187 154 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0187 Amo-Chr10 1972988 1974075 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0187 1 127 C2C2-CO-like Transcription Factor Family AT4G27310 40.244 6.36e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo10g0187 zf-B_box 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0187 - - gmx:100805832 159.458