Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0184 ATGGGATCCACAACTCACACCAACTTTTTACATGCTTTGATCATGTTTTCCTTCATTTTCTTTGGCTTCACTTCTGCCAGGGATACCATTACATCATCTCAATTCATCACAGGCTCAGAGACAATAAGCTCATCTGACAGTGTCTTCAAACTTGGATTTTTCAGCCCTCAAAATTCAACTAACCGCTATGTTGGAATCTGGTATCTCTCTGAGTCCGACATCACTGTTATATGGATTGCCAACAGGAACCAACCACTCTTGGATTCTTCAGGGACACTGAAAATCTCTGGAGATGGTAATCTTGTACTACTTGATGGAAAAGACCAATTAGTTTGGTCATCAAATGTGTCAACAAACATGGCTAACAGCTCCACTGCTCAACTCTTGCGATCCGGGAATCTTGTGTTGCAAGATAACATCACTGGACAAACCATTTGGGAGAGTTTCAAGCACCCTTGTGATGCAGCAGTGCCAACTATGAGAATCAGTGCTAATAGGATCACAGGTGAGAAAACCAGGTTCATATCAAGGAAGAGTGCTTCTGATCCTTCTACTGGGAGCTTCTCTGCTTCTCTTGAACGCTTGGATGCTCCAGAAGTGTTCTTTTGGGTAAATGGAACTCGACCGTTTTGGAGGACTGGTCCATGGAATGGTAGGATCTTCATTGGGACAACAATGATGTCAACAGGGTACCTATATGGATGGAGTGTTGGATATGAAGGGAATGAAACTGTTTATCTTACTTACAGTTTTGCTGATCAATCTGCATTTGGAATCCTTTCACTAACTCCGATTGGCAAGCTTCGATTGTTGAGATATTATAACAGAAAGCAAGTTCTTGATATAGAGTTGGAAATTTCTGATTGTGATGTTTATGGGGTATGTGGGCCATTTGGGAGTTGTAATACACAGAATTCACCAATCTGCAGCTGTTTGAGTGGATATGAGCCTAGGAATTTGGAGGAGTGGAAGAGGCAAAACTGGACCAGTGGTTGTGTGAGGAAGGAACCACTCAAGTGTGAGAGAATGAGGAAGAATGGAAGTGAAGTAGTAGCAGGCCAAGTCCAAGAAGATGATGGTTTCTTGAAACTTGCAACTATGAAGGTTCCGGATTTCGCAGAGAGGTTGGATGTTGAGGAAGAACAATGTGGACCTCAGTGCTTGAAGAATTGCTCCTGTTTAGCATATGCATTTGATACTGGCATTGGCTGCTTGTATTGGATCACAGATTTGATTGACTTGCAACAATTCTCAAGCGGAGGAGTTGATCTTTTCATCCGTCTCCCCCATTCAGAACTAAAAAACGCAGTAAACAACCATAAGAGTTCAAGAAAGAACACATTGATCATTGCTGTAACAGTGGGAGCAGCCGGAGCCATTATCTTGGCGGCTTGTGCATATCTAGCCATTTGTGCCAAGCACACCAGGAAAAGAAGAGTTAAGGATTCAGAAAATCAGAGTCATAGATTGATTGGGGTTAAGAAGCAAGTTAAACTGGATGAGCATGAATTGCCGCTATTTGATTTTGAAGTGGTTGCAACTGCTACAAACAATTTTCACTTGTCAAATACACTTGGGAAAGGTGGCTTTGGTCCAGTGTACAAGGGGTTATTGCCAGATGGTCAAGAAATTGCAGTGAAAAGATTGTCCAGAGCATCTGGACAAGGGGCTGAAGAGTTCATGAATGAGGTGGCTGTGATTTCTAAGCTTCAACATCGCAATCTTGTGAGACTTCTTGGCTGCTGCATTGATGGAGATGAAAAGATGCTGGTCTATGAGTTCATGCCAAATAAAAGTTTGGATGCATTTATCTTTGATCCTCTACAAAGAAAACTTTTAGATTGGACAAAACGTTTCAACATAATTGAAGGGATTGCTCGTGGTATACTTTATCTTCACAGAGATTCTAGATTAAGAATTATACACAGAGATTTGAAGGCAAGCAATATCTTGCTTGATGCGGAGATGAATCCTAAAATATCAGACTTTGGTTTGGCGAGAATATACAAAGGTGAAGACGAGGTTAATACTAGAAGAGTTGTTGGTACATATGGTTACATGGCTCCGGAATATGCAATGGAAGGACTATTTTCGGAGAAATCAGATGTTTACAGCTTCGGAGTTTTGTTACTAGAGATTGTCAGCGGAAGAAGAAATACAAGCTTTCGCAACCATGAGAAATCCCTCAGCCTTATTGGATTTGCATGGAGGCTATGGAATGAAGATGACATTAGATCCTTGATAGATTCAGATATATCTGATTTGGGTTCAGGTTCTGAGAATCATATTCTGAGGTGCATACACATAGCATTTCTATGTGTTCAAGAAGTTGCAAAAGAAAGACCTCCTATGACTAGTGTTGTGTCCATGCTGAATAGTGATGAGACTTTCCATCTTCCTCCTCCTAAGCAAGTTGCATTTGTGCAGAAGGAATATTCATCAAGTTTGGAATCTTCCTCTCAGGAAAATCAATGTAACTCAAATAACAATGTTACTCTTACTGAAATCCGTGGCAGATAG 2520 0.4103 MGSTTHTNFLHALIMFSFIFFGFTSARDTITSSQFITGSETISSSDSVFKLGFFSPQNSTNRYVGIWYLSESDITVIWIANRNQPLLDSSGTLKISGDGNLVLLDGKDQLVWSSNVSTNMANSSTAQLLRSGNLVLQDNITGQTIWESFKHPCDAAVPTMRISANRITGEKTRFISRKSASDPSTGSFSASLERLDAPEVFFWVNGTRPFWRTGPWNGRIFIGTTMMSTGYLYGWSVGYEGNETVYLTYSFADQSAFGILSLTPIGKLRLLRYYNRKQVLDIELEISDCDVYGVCGPFGSCNTQNSPICSCLSGYEPRNLEEWKRQNWTSGCVRKEPLKCERMRKNGSEVVAGQVQEDDGFLKLATMKVPDFAERLDVEEEQCGPQCLKNCSCLAYAFDTGIGCLYWITDLIDLQQFSSGGVDLFIRLPHSELKNAVNNHKSSRKNTLIIAVTVGAAGAIILAACAYLAICAKHTRKRRVKDSENQSHRLIGVKKQVKLDEHELPLFDFEVVATATNNFHLSNTLGKGGFGPVYKGLLPDGQEIAVKRLSRASGQGAEEFMNEVAVISKLQHRNLVRLLGCCIDGDEKMLVYEFMPNKSLDAFIFDPLQRKLLDWTKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDAEMNPKISDFGLARIYKGEDEVNTRRVVGTYGYMAPEYAMEGLFSEKSDVYSFGVLLLEIVSGRRNTSFRNHEKSLSLIGFAWRLWNEDDIRSLIDSDISDLGSGSENHILRCIHIAFLCVQEVAKERPPMTSVVSMLNSDETFHLPPPKQVAFVQKEYSSSLESSSQENQCNSNNNVTLTEIRGR* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0184 839 CDD PAN_AP_plant 353 429 - -
Amo10g0184 839 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Amo10g0184 839 Gene3D - 23 150 IPR036426 -
Amo10g0184 839 Pfam S-locus glycoprotein domain 211 318 IPR000858 GO:0048544
Amo10g0184 839 ProSiteProfiles Bulb-type lectin domain profile. 27 149 IPR001480 -
Amo10g0184 839 SMART serkin_6 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0184 839 Pfam PAN-like domain 356 414 IPR003609 -
Amo10g0184 839 PIRSF SRK 2 839 IPR024171 GO:0004674
Amo10g0184 839 SUPERFAMILY Protein kinase-like (PK-like) 504 819 IPR011009 -
Amo10g0184 839 Pfam Protein tyrosine and serine/threonine kinase 520 735 IPR001245 GO:0004672|GO:0006468
Amo10g0184 839 SMART blect_4 33 152 IPR001480 -
Amo10g0184 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Amo10g0184 839 ProSiteProfiles PAN/Apple domain profile. 340 429 IPR003609 -
Amo10g0184 839 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 837 - -
Amo10g0184 839 ProSiteProfiles Protein kinase domain profile. 519 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0184 839 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 18 837 - -
Amo10g0184 839 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Amo10g0184 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 218 IPR036426 -
Amo10g0184 839 Pfam D-mannose binding lectin 75 178 IPR001480 -
Amo10g0184 839 CDD STKc_IRAK 525 792 - -
Amo10g0184 839 CDD B_lectin 33 152 IPR001480 -
Amo10g0184 839 Gene3D Transferase(Phosphotransferase) domain 1 595 799 - -
Amo10g0184 839 MobiDBLite consensus disorder prediction 817 839 - -
Amo10g0184 839 SMART ntp_6 356 428 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0184 Amo-Chr10 1932000 1935455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0184 437 820 Receptor kinase-like Gene Family AT4G05200 50.515 2.84e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0184 PK_Tyr_Ser-Thr 7.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0184 - - gmx:112998788 1253.81