Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0145 ATCCAGCTGCGACAGTTTGAACTCACAAGTGAGGCTTTTCCTGAAAGTGCAAGATATATATTTGATTTTGAAATGGCTATTAACATCGTTGGTGCGATCACGGGCGTTATGAGCTGCCTCTGTACACAGAACTGTCTTCAAGAATCACTTGGTCATCATATTAGACACCTTAGAAGACCCAAAAGGAATTTGAACAAGCTCAAGTCATTGTTGGAGGAGCTAGATGCCCGGAAAGTCGACATGTGTGCCAAGCTAAATCAAATGTGGCTTCAAAAAGGGATGAATCCAAAGAAAGAAGTGGAATTGTGGCTGAAAAATGTTGATGAGATTGCAAATGAAGTAAATAAGATCATAAGGGAAGTTGAACAAGAAAGTGGAAGCACAAGTGTTCTCTCTCCATTTTATTATAGTTCAAGAATAAAGAGAGGAGAACTTATTGAGAAAAAAATGGAGGAGGTGAGAGAGCTTCTAGAGAAAGGTCGATTTGCAGATGATTCATTGGCTGAAACTTCGCCTCAAAAAGGGCAAACCCTTCCAACAACAAAGCTAATGGAACACGAAACAACAATGAAAAACTTGAACAAGATTTTGAACTTCATATTGGATGATAGAGTGAGAATTATTGGTGTTCATGGGATGGGCGGAGTGGGGAAAACAACTATCATGGCTGAAATTAACAATAGACTATTGAGGGAAAATAGACTATTTGACAGTGTTATTTGGGTTAGTTCCTCAAAGGACATGAAAACTGAGGAGTTACAAAAGGTTATTGCAGGGAAGTTTGATATAGACCTTTCAGGATTTCAGGATGAGACTTCAGGAGCTGCCACACTGTTTGAAGCTTTCCAAAGAAGGAAGAAGTTTGCCTTGATTCTGGATGATCTATGGGAGCCATTCTCTCTTGAAAGAGTTGGAATACCAATACCAACTGTGGAGAACGGTTGCAAACTGCTAATAACTACTCGAAGGGTAAGCGTTTGCCGAGGCATGGAAACAGATAGAGATGTCAAAGTAAAGGCTCTTACAGAAAATGAAGCATGGGATCTCTTCAGGGACAAAGTTGGGGATGAAGCATTGGCCTCTCCGGACATCAAACTGATTGCAAAAGATGTGGCAAAAGAATGCATGGGATTACCTCTTGGTATTGTTACCGTGGGGCGTGCCTTGAGAAATGCAACTGATATTTCAGAATGGCAGATTTCATTGATGGGGTTAAAAGCTTCAGCTCTCAACATAGAACAAATGGAAGAATCTGTTTTTTCTCGTTTGAAATTCAGCTTCACAAAATTGAAGGATGACACGAGTAGGTCCTGTTTTCTATATTGTGCTCTCTATCCTGAAGGTAATCATGTTGATGCAAATGAATTGATTGAGTATTGGATGTGGGAAGGTTTATTAGGTGCTGTGGATAGCATTTCAGCAAGCAAACAGAAGGGGAAAATCATATTGAATGAACTAAAATATGCATGCTTGTTGGAAAATGCTGCAGACAATGAGATGGAATCTGGCAACAAATTGAAGAAACCTCCCCAAATTGATGAATGGACAGAAGATGCTCTAAGGGTGTCATTGATGAAAAATGATCTGAATAATATCTTTCTTGGCAATCCTCCATCATGTCCAGCTGTTACTTCCCTGTTATTGCAATACAACTCTTTCCCTCAAAACATACCTTATGACTTCTTTGATTTCATGCAAAGCCTAAAGGTTCTTGATCTCTCTTACACTGGGATCCATGTGCTGCCGGGTTCGGTTTCTAACTTAGAGAATCTATGTGCCTTATTATTGAGCAATTGCTGGAATTTGAAATTGATCCCTTCTGTGGCAAAACTCACTAAGTTGATGGTTCTCGACCTTTCGGGTTGCCAAAACATAAAGCAACTTCCCCATGGGACAGAACAGCTATGCAACCTGAGAAGGCTAAATATTTCCAATACCATGATTAACATCTTGCCATCTGGTTTTCTCTCAGCATTAACCCTTCTAGAGGAGTTATTAGCATCTAATGCTCTCGTCTTTCAAAAAACATTGCCACTCAGCGTTTCTGAAATCAGCATTGGTGAAATCATATCCTCCTCAAGATTATCATCTCTTGAAGTGGATTTCTGGCACTGTGATCTCTATAATCTGTATGCTTGCTCTGGTCACTGTGCTCAGCTAGAGAAGTTCAAGTTCAATGTTGGACCAGGAGAAATCCAAGAATTTTCGGAGAAATGGAGTGTGGCATTTCTCAGCATATCCATTGCCAAAGAGGAAATTTCAATCCCAGCAAATACTATCGAGTTGAAGTTTATTGACTGCTATGATATCACAGAGTTAACTACTTGCCTTTTGCATGTAGAGAAGCTCAAGAAATGCACAGTAGTTTGCTGTTACAGTGTAGAAAGAATTGTTGACACTGAGCAGATTGATTTATCTATGCTGGAGACTTTGGTGCTGAGATATTTGATCAATTTGCAGATGATATGTAGGGAAGTGATGACTTCATCTGCATTTATGAGATTAAAGATCATAAATGTAGAATTTTGTCCAAATTTGAAGAGCCTATTCTCAGGGAACCTTTTGCTTCAACTGTCAAATCTTGAAGAAATTAGAGTCGGCCACTGCAACAAGATGGAGGATTTGATGAGATGGGAAGGAGGAGGAAGAAACAGTAATGACATTCATGCTGCCAAAATTCACTTGCCTAGATTAAGGAAATTGAGGTTGGAGTTCATGCCAAATTTAAAAGGAATATATGATGGATTCATGAGTTATGGCTCTCCATGCTCTTTTCAAGTAGTTTCTTGTGATGCACTGAAGAGATTACCCTTTGATCTTGATGAATTAGTAGGCCTTAACCAGCAACTATTGTCACCGCATGCTTTGGAAATCAAAGGAGCAAAGTGTTGGTGGGATTCACTTGAGTGGGATGAACCTGATGCCAAGCAAATAATGCAGACATATTTCATAGAGATGACAATGGTGTCAGATAATGTTGGTAGCAGCAGCCAAGTAGGAGCAATAGTTCCAAATAGATAG 3021 0.3962 IQLRQFELTSEAFPESARYIFDFEMAINIVGAITGVMSCLCTQNCLQESLGHHIRHLRRPKRNLNKLKSLLEELDARKVDMCAKLNQMWLQKGMNPKKEVELWLKNVDEIANEVNKIIREVEQESGSTSVLSPFYYSSRIKRGELIEKKMEEVRELLEKGRFADDSLAETSPQKGQTLPTTKLMEHETTMKNLNKILNFILDDRVRIIGVHGMGGVGKTTIMAEINNRLLRENRLFDSVIWVSSSKDMKTEELQKVIAGKFDIDLSGFQDETSGAATLFEAFQRRKKFALILDDLWEPFSLERVGIPIPTVENGCKLLITTRRVSVCRGMETDRDVKVKALTENEAWDLFRDKVGDEALASPDIKLIAKDVAKECMGLPLGIVTVGRALRNATDISEWQISLMGLKASALNIEQMEESVFSRLKFSFTKLKDDTSRSCFLYCALYPEGNHVDANELIEYWMWEGLLGAVDSISASKQKGKIILNELKYACLLENAADNEMESGNKLKKPPQIDEWTEDALRVSLMKNDLNNIFLGNPPSCPAVTSLLLQYNSFPQNIPYDFFDFMQSLKVLDLSYTGIHVLPGSVSNLENLCALLLSNCWNLKLIPSVAKLTKLMVLDLSGCQNIKQLPHGTEQLCNLRRLNISNTMINILPSGFLSALTLLEELLASNALVFQKTLPLSVSEISIGEIISSSRLSSLEVDFWHCDLYNLYACSGHCAQLEKFKFNVGPGEIQEFSEKWSVAFLSISIAKEEISIPANTIELKFIDCYDITELTTCLLHVEKLKKCTVVCCYSVERIVDTEQIDLSMLETLVLRYLINLQMICREVMTSSAFMRLKIINVEFCPNLKSLFSGNLLLQLSNLEEIRVGHCNKMEDLMRWEGGGRNSNDIHAAKIHLPRLRKLRLEFMPNLKGIYDGFMSYGSPCSFQVVSCDALKRLPFDLDELVGLNQQLLSPHALEIKGAKCWWDSLEWDEPDAKQIMQTYFIEMTMVSDNVGSSSQVGAIVPNR* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0145 1006 Pfam NB-ARC domain 192 427 IPR002182 GO:0043531
Amo10g0145 1006 PRINTS Disease resistance protein signature 282 296 - -
Amo10g0145 1006 PRINTS Disease resistance protein signature 375 389 - -
Amo10g0145 1006 PRINTS Disease resistance protein signature 207 222 - -
Amo10g0145 1006 PRINTS Disease resistance protein signature 609 625 - -
Amo10g0145 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 442 IPR027417 -
Amo10g0145 1006 PANTHER OS12G0491200 PROTEIN 50 493 - -
Amo10g0145 1006 Coils Coil 64 84 - -
Amo10g0145 1006 PANTHER OS12G0491200 PROTEIN 509 947 - -
Amo10g0145 1006 Gene3D - 340 426 IPR042197 -
Amo10g0145 1006 Pfam Leucine rich repeat 542 599 IPR001611 GO:0005515
Amo10g0145 1006 Gene3D - 166 337 IPR027417 -
Amo10g0145 1006 PANTHER DISEASE RESISTANCE PROTEIN RP 509 947 IPR044974 GO:0006952
Amo10g0145 1006 PANTHER DISEASE RESISTANCE PROTEIN RP 50 493 IPR044974 GO:0006952
Amo10g0145 1006 Coils Coil 104 124 - -
Amo10g0145 1006 Gene3D - 427 503 IPR036388 -
Amo10g0145 1006 Gene3D Ribonuclease Inhibitor 834 957 IPR032675 -
Amo10g0145 1006 SUPERFAMILY L domain-like 517 939 - -
Amo10g0145 1006 Gene3D Ribonuclease Inhibitor 504 726 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0145 Amo-Chr10 1606639 1609891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0145 205 652 WRKY Transcription Factor Family AT5G45050 23.364 3.84e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0145 - K13459 ahf:114924594 938.332