Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0129 ATGGGATGTACGAATTTGGTGTTGCATGTTCGACTCTTTGTTACTCTGATGGTGATTCTTGCTGGAACTTTCTGTGCAGTTGGTGACACTGACGTAGTTGATGTTGCAGCAATCAGTAGTCTATATGTTGCTCTTGGCTCACCGCCTCTTCTAGGGTGGAAGCCTGTGGGAGGAGATCCATGTTTTGAAATGTGGCAAGGTGTTGGCTGTGTATTTTCCAACATCACTTCCATAAGACTTGATGGCCTGAATTTGGGTGGAGAGCTTGGTAGTAATTTGAATTTTCCATCCATCTTAGAAATTGATCTTAGCAACAACCACATTGGAGGGCCCATTCCATTCACTTTGCCCCCTACTCTTACAAGCTTGTCTCTCTCAGGAAACCAGTTAAATGGAAGCATTCCAGATGCTTTATCATTACTAACTCAATTGTCACACTTGGATTTGTCAAATAACAACTTGAGTGGTCAGCTGCCTTCCTCAACAGGGACTTTATCATCCCTTACTACATTATACTTGCAGAACAATCAACTCTCTGGGACCCTTTATGTTTTGCAGGACCTGCCTCTTCAGGATCTGAATATTGAGAATAACTCATTCTCCGGGCCAATTCCGCCAAAACTGCTGAGTGTCCCTATTTTCAGAAAAGATGGAAATCCATTTAATACTAGTGTTATTCCATCACCTGCCGCAGCCCCATCACCTGCAGCTATGGCTCCATCCCCTGGGAAATCACCGTGGAGATTAGCAAATAGTCCTTTTTCCCCAACTGCATCAGTGCTTGCAAGTGCTAGGAAGTCATTTATAGCTAAGAATATCATTTGGATTGCTGGTGCTGGTCTTTTGATATTTATTTTGTTAGGTGTTTGTATTTTTATGCTGTGGTGCTTTAAACGAAGGCCAGAGAAGAAAAATGCCAAGAAGCAAAATGTTGGTGTCTTCGAAAGTCCTTTACATAAACCTACTTGCAGTGACACTTCCTTTGAAACAACCAATCAGGAGGAGAAAGCAGTTGAGAAACCATCACTTGTATCTGAAGTGCCAAATAGAAAAACAAATTTGATTCCAAAGGTTCAGGATGAACAAGGAAAATATGTGAAAACAGCATCTGCAACTTCACAATACAATCATGGTTCTGAGTTAATCAACACTAGTGAGGCTTCCAAACTTTCACACCTCCAGCCACCACCGCGTCCTTACCCAACGACACAAAGTCAGAAGTTGATCCTCAATCCAGCTATACCTGTCAAAGGGTCTGAAATAAATGACAAAACATGTTCCCTTGAAGTTTATTCTATTGCATCACTTCAACAATATACCAATAGCTTTTCCCAAGAAAATTTTATTGGGGAAGGCACCTTAGGGCCTGTTTATAGGGCTGAGTTCCCTGATGGAAAGATATTGGCTGTGAGGAAATTAGATGCCACTGCTTCTATGGAGCAGAACCATGAACAATTTCTCCAATTAATGTCCAACATCTCAAAAATTCAGCACCCTAATATTGTAAAGTTTACGGGCTACTGTACCGAGTATAGCCAACGGCTGCTTGTGTATGAGTATTGCAGTAATGGAACCCTGCATGATGCACTGCATGGCGATAGTGAATGCCGTATTAGACTAACATGGAATGCTCGAATTCAGGTGGCTCTTGGAGCTGCAAGAGCTTTAGAGTATATGCATGAGAACTTTCGGCCACCTATTGTGCACCGAAATTTTAAGTCTGCCAATGTACTCCTAAATGACAACCTGGAAGTGTGCATCTCTGATTGTGGATTAGGTCCTTTGCTATCTTCTGGCTCTGCTGGTCAGTTATCAGGACGACTCCTCACGGCTTATGGCTACAGTGCTCCAGAATTTGAGTTCGGAAGCTATACACATCAAAGTGATGTATTCAGTTTTGGAGTGGTAATGTTGGAACTTCTCACGGGACGAAAATCCCACGACAGGTCACTTCCGCGAGGGGAGCAAATATTGGTGAGATGGGCAGTCCCTCAACTCCATGACATCGACGCATTGTCGAAAATGGTTGACCCCAGCTTAAATGGAGCCTATCCTATGAAGTCCTTGTCGCGTTTTGCAGATATTGTTTCTTCATGCGTCCAGCATGAACCTGAATTCAGGCCAGCAATGTCTGAAGTTGTTCAAGATCTTCTAAGGATGATGTAA 2166 0.4284 MGCTNLVLHVRLFVTLMVILAGTFCAVGDTDVVDVAAISSLYVALGSPPLLGWKPVGGDPCFEMWQGVGCVFSNITSIRLDGLNLGGELGSNLNFPSILEIDLSNNHIGGPIPFTLPPTLTSLSLSGNQLNGSIPDALSLLTQLSHLDLSNNNLSGQLPSSTGTLSSLTTLYLQNNQLSGTLYVLQDLPLQDLNIENNSFSGPIPPKLLSVPIFRKDGNPFNTSVIPSPAAAPSPAAMAPSPGKSPWRLANSPFSPTASVLASARKSFIAKNIIWIAGAGLLIFILLGVCIFMLWCFKRRPEKKNAKKQNVGVFESPLHKPTCSDTSFETTNQEEKAVEKPSLVSEVPNRKTNLIPKVQDEQGKYVKTASATSQYNHGSELINTSEASKLSHLQPPPRPYPTTQSQKLILNPAIPVKGSEINDKTCSLEVYSIASLQQYTNSFSQENFIGEGTLGPVYRAEFPDGKILAVRKLDATASMEQNHEQFLQLMSNISKIQHPNIVKFTGYCTEYSQRLLVYEYCSNGTLHDALHGDSECRIRLTWNARIQVALGAARALEYMHENFRPPIVHRNFKSANVLLNDNLEVCISDCGLGPLLSSGSAGQLSGRLLTAYGYSAPEFEFGSYTHQSDVFSFGVVMLELLTGRKSHDRSLPRGEQILVRWAVPQLHDIDALSKMVDPSLNGAYPMKSLSRFADIVSSCVQHEPEFRPAMSEVVQDLLRMM* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0129 721 SUPERFAMILY Protein kinase-like (PK-like) 426 717 IPR011009 -
Amo10g0129 721 Gene3D Ribonuclease Inhibitor 36 231 IPR032675 -
Amo10g0129 721 SUPERFAMILY L domain-like 45 208 - -
Amo10g0129 721 Gene3D Transferase(Phosphotransferase) domain 1 521 721 - -
Amo10g0129 721 ProSiteProfiles Leucine-rich repeat profile. 119 141 IPR001611 GO:0005515
Amo10g0129 721 PANTHER LEUCINE RICH REPEAT KINASE 2 10 149 - -
Amo10g0129 721 PANTHER LEUCINE RICH REPEAT KINASE 2 141 721 - -
Amo10g0129 721 PRINTS Leucine-rich repeat signature 120 133 - -
Amo10g0129 721 PRINTS Leucine-rich repeat signature 141 154 - -
Amo10g0129 721 Pfam Protein tyrosine and serine/threonine kinase 446 717 IPR001245 GO:0004672|GO:0006468
Amo10g0129 721 MobiDBLite consensus disorder prediction 324 343 - -
Amo10g0129 721 Coils Coil 720 721 - -
Amo10g0129 721 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 10 149 - -
Amo10g0129 721 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 141 721 - -
Amo10g0129 721 Gene3D Phosphorylase Kinase; domain 1 415 520 - -
Amo10g0129 721 ProSiteProfiles Protein kinase domain profile. 443 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0129 Amo-Chr10 1525009 1530019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0129 30 721 Strubbelig Receptor Gene Family AT4G03390 50.134 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Amo10g0129 PK_Tyr_Ser-Thr 6.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0129 - - ahf:112783685 1282.32