Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0112 ATGTCAGACTCGTCGAATGGCTCTGGCTCAATTTTGCGTGGCTCTCGGAAATTTGAGAATCGGAAACATTTGAAAGCCAAATCACCTTGTGTTGATAATGGATCAAAACTTGTTGTCAAAGCTGCCTACGGAGAAGATATGATCCGTTTCAAGTTTGATCCTGCAGCTGGCTGTCTCCAGCTCTATGAAGAAGTTGCAACAAGATTCAAATTACAAATCGGATCTTTCCAGCTCAAGTATCTCGACGATGACGAGGAATGGGTGAGGATGGTAAATGACTCAGATTTGAAAGAATGCATGGAAATATTGGATGATCATGGCACCCGTGCTGTGAAATTTCTTGTTCTCGACATCCCTAGTGGTTTGAGCAGCCGTGGCAGTAACACTTGA 390 0.4359 MSDSSNGSGSILRGSRKFENRKHLKAKSPCVDNGSKLVVKAAYGEDMIRFKFDPAAGCLQLYEEVATRFKLQIGSFQLKYLDDDEEWVRMVNDSDLKECMEILDDHGTRAVKFLVLDIPSGLSSRGSNT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0112 129 Gene3D - 34 119 - -
Amo10g0112 129 SUPERFAMILY CAD & PB1 domains 30 120 - -
Amo10g0112 129 ProSiteProfiles PB1 domain profile. 36 118 IPR000270 GO:0005515
Amo10g0112 129 SMART PB1_new 36 118 IPR000270 GO:0005515
Amo10g0112 129 PANTHER PROTEIN NLP8 1 128 IPR045012 GO:0003700
Amo10g0112 129 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 1 128 - -
Amo10g0112 129 Pfam PB1 domain 38 115 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0112 Amo-Chr10 1319869 1320258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0112 6 128 NLP Transcription Factor Family AT2G43500 57.031 6.48e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0112 - - adu:107468617 256.914