Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0111 ATGAATGGAAGTGAAGAACAGCAACTTTTATTAAACAATCTATCAGATACTATGCAGAGAATGTGTCAGAGTTTGAGGACAGTTTCGGATGCTGAATTATACGGGATAGAAGGTTCGCAAGTGCAGTTTTCAAAGGAAGAAGGCTCTCATATGGCACCGGATGGTGACCATGATTCGGTCCAGCCTATGTCATTGACAAACAATGAAACTGAAGCTGCTCATAACCAGGCAATGGATGGATCAAGAAAGCAGATTGAGAAAAAGAAAAGTCCAGCGGAGAAGAATATTAGCTTGAGTGTTCTCCAGCAATATTTCTCCGGTAGTCTTAAAGATGCGGCTAAAAGCCTTGGTGGTAAGACTACTACAGCTTTGTTCCTGCAGATTTCTTTTAACTTATTCAATCAGCATATTACTTTGGGTTAG 423 0.4043 MNGSEEQQLLLNNLSDTMQRMCQSLRTVSDAELYGIEGSQVQFSKEEGSHMAPDGDHDSVQPMSLTNNETEAAHNQAMDGSRKQIEKKKSPAEKNISLSVLQQYFSGSLKDAAKSLGGKTTTALFLQISFNLFNQHITLG* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0111 140 PANTHER PROTEIN NLP8 1 122 IPR045012 GO:0003700
Amo10g0111 140 MobiDBLite consensus disorder prediction 70 92 - -
Amo10g0111 140 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 1 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0111 Amo-Chr10 1318771 1319257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0111 1 122 NLP Transcription Factor Family AT3G59580 46.154 1.98e-24 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Amo10g0111 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0111 - - adu:107468617 231.106