Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0102 ATGATCTCTGCAGATTCTCGTACGGAGAATTATGCTGGTTTCGTATATGAGAATGGTCCTATGTCGGTGTTCTCCAATAGTAATAATCATCAGAACCCTGAAAATGTGTTCAAGTTTGAAGATTCATCTTCAAATCATGCAGAATCTCCTACTAGTGATGATCCTGATGGCACAAATAATGGAGAATCACACGCAGAGAGTACTAAGCACTCAAACCCTATTCTCAGATACATAAGTGAGATTCTGTTGGATGAGGAAGATGATTTGCAGCAAAAGCCCTGTATGTTGCATGATTGTTTGAAGCTCCAGGCTGCCGAGAAGGGGTTCTACGACGCCATCGGCCGCAGCTACCCTTCGTCGCCGTCAAAGATCTATGGTGGTTTTGGGGATGATTGCCATGATCCTGATGATAGTAATTTTGGTAGAACAACTAGCTCTGAGAGCAATAGTAGCAGCTACAACACTAGTGAAAATTCATGCGAGTCTGATTGGTTCAATGGATGGGGTGATTTTGAGTCCAAATTCCTTCAAAACACTCTGATTGAGTCCCCAGAAATAAAGAACTCCTATGAGGTTTTAGGGTTAGGTAATTCTCAAATTAGGGATTCGCATGGTTCTGTCTATTTTCAAAATGGAACCTTGCACAACATAATTCCAGATATGCTGCCACCAATTACTGGAGGAGGTAGTGGTAGATCAAGGGAAAAGAGGAGCCATCATGTRGATGATGSCACACAAGAAGGGGAGAGAGGAAACAAGCTCTCAGCTGTGTATGCCGATGAGTCGGAGCCATTGGAGATGTTTGATGCAGTGCTGCTTTGTCAGGATGGCAAGAGTCCTGCCATTTTTTGTGGCGACCGCGAATCCGACTCGGGTGGATCTAATGTGAAGGCAAGCCGTTCGAAGAAAGGTGCGAACAAGGGTGGAGCTACCAACAAAGGGGGCACCATAAGTACAACAGTTGATTTATGGAGTCTCCTAACTCAATGTGCACAAGCTGTGGCAAGCTATGATCAGAGGAGTGCGAATGAGATACTCAAGCAGATAAGGCAGAACTCTCCGGCTTCTGGCGATGGGTTGCAGCGTTTGGCTAAGTACTTCGCCGATGGCCTTGAGTCGAGGTTAGCTGCCGGGACACCCAAGTATATCCTCCTTCAGTCAGCATCTGCTGCAGATATGTTAAAGGCATACAAAGTTTACATCACAGCCATCCCATTTCAAAGGATGTCAAATTTCTTGGCTAATAGGACTATTCTGAAGCTAGCACAGAATGAAAGCAGTCTTCACATTATTGACTTTGGGATTTTCTATGGTTTCCAGTGGCCTTGCCTCATCCAGCGCCTTTCAGAGAGACCTGGAGGGCCTCCTAGGCTTCGGATCACTGGAATTGATCTTCCTCAGCCTGGATTCAGGCCTGCAGAAAGGGTTGAGGAGACCGGGCGACGCTTGAAAAACTATTGCAAGAGGTTTGGGGTCCCATTTGAGTACAATTGCCTTGCACAGAAGTGGGAAACCATACAACTCGAAGATCTCAATATCGATAGGAATGAAGTGACCGTGGTTAACTGTCTATACAGATTGAAGAACCTGTCTGATGAGACTGTGACCGCGAACTGTCCAAGGGATGCCGTATTAAGGTTGATCAGGAGGATAAATCCAAACATCTTTATCCATGGTGTGATCAATGGCACTTACAATGCCCCATTTTTCTTGACTCGTTTCAGGGAGGCGCTCTTCCACTTCTCGGCATTGTTTGACATGTTTGAGGCCACTGTGCCACGCGACAATCCACATAGGCTGATGTTTGAGCAGGGGTTGTTTGGAAGGGATGCCATCAATGTCATAGCATGTGAAGGGGCTGAAAGAGTAGAAAGGCCAGAGACCTATAAGCAGTGGCAAGTTAGGAACAGAAGAGCAGGGTTCAAGCAACTTGCAATTGCACCAGAACTGTTAAATAGAGTCAAAGGAATGGTGAAGAAGGAATATCACAAAGATTTTGTAGTGGATGAAGACGGAAAATGGGTCTTACAAGGATGGAAAGGGAGAATTCTCCATGCGCTCTCTCCTTGGGTTCCTGCTTAA 2082 0.4563 MISADSRTENYAGFVYENGPMSVFSNSNNHQNPENVFKFEDSSSNHAESPTSDDPDGTNNGESHAESTKHSNPILRYISEILLDEEDDLQQKPCMLHDCLKLQAAEKGFYDAIGRSYPSSPSKIYGGFGDDCHDPDDSNFGRTTSSESNSSSYNTSENSCESDWFNGWGDFESKFLQNTLIESPEIKNSYEVLGLGNSQIRDSHGSVYFQNGTLHNIIPDMLPPITGGGSGRSREKRSHHVDDXTQEGERGNKLSAVYADESEPLEMFDAVLLCQDGKSPAIFCGDRESDSGGSNVKASRSKKGANKGGATNKGGTISTTVDLWSLLTQCAQAVASYDQRSANEILKQIRQNSPASGDGLQRLAKYFADGLESRLAAGTPKYILLQSASAADMLKAYKVYITAIPFQRMSNFLANRTILKLAQNESSLHIIDFGIFYGFQWPCLIQRLSERPGGPPRLRITGIDLPQPGFRPAERVEETGRRLKNYCKRFGVPFEYNCLAQKWETIQLEDLNIDRNEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPNIFIHGVINGTYNAPFFLTRFREALFHFSALFDMFEATVPRDNPHRLMFEQGLFGRDAINVIACEGAERVERPETYKQWQVRNRRAGFKQLAIAPELLNRVKGMVKKEYHKDFVVDEDGKWVLQGWKGRILHALSPWVPA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0102 693 MobiDBLite consensus disorder prediction 220 254 - -
Amo10g0102 693 MobiDBLite consensus disorder prediction 285 312 - -
Amo10g0102 693 MobiDBLite consensus disorder prediction 18 71 - -
Amo10g0102 693 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 25 692 - -
Amo10g0102 693 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 692 IPR005202 -
Amo10g0102 693 MobiDBLite consensus disorder prediction 126 156 - -
Amo10g0102 693 MobiDBLite consensus disorder prediction 232 249 - -
Amo10g0102 693 MobiDBLite consensus disorder prediction 20 71 - -
Amo10g0102 693 Pfam GRAS domain family 325 690 IPR005202 -
Amo10g0102 693 MobiDBLite consensus disorder prediction 141 156 - -
Amo10g0102 693 ProSiteProfiles GRAS family profile. 314 691 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0102 Amo-Chr10 1225043 1227705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0102 74 693 GRAS Transcription Factor Family AT1G07530 44.493 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo10g0102 GRAS 8.8e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0102 - - gmx:100815586 936.021