Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0100 ATGAGGAAGAAGTGTGAGCTGTGTAACTGTGCTGCAAACTTGTTCTGTGATTCAGATCAAGCAAGCCTTTGTTGGGAATGTGATGCAAAGGTTCACAGTGCAAACTTTCTGGTCACAAAGCATCCAAGGATTCTTCTATGCCATGTTTGTCAATCACTAACACCTTGGCATGGTTCAGGTCCCAAGTTTGTTCCCACCATGTCACTTTGCACTGATTGTGTCACCAAAAACAATGATACCTGCAACCACCAGAATGATGATGATGTAGAAAATGATGGTGTTGATGGTGGTGAGGATGAAGATGAAGATGAAGATGAAGAAGAAGAAGAAGAAGAAGAAGAAAATCAAGTGGTTCCATGGACATCATCAACATCAATGCCTCCACCACCAGTTTCCTCTTCTTCAAATAGTGCAACCACTACTTCCACCAGGTTCTCTAATGGTGCTGAAGAAGAAGCAATCTCCAACTGA 471 0.4246 MRKKCELCNCAANLFCDSDQASLCWECDAKVHSANFLVTKHPRILLCHVCQSLTPWHGSGPKFVPTMSLCTDCVTKNNDTCNHQNDDDVENDGVDGGEDEDEDEDEEEEEEEEENQVVPWTSSTSMPPPPVSSSSNSATTTSTRFSNGAEEEAISN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0100 156 MobiDBLite consensus disorder prediction 91 116 - -
Amo10g0100 156 CDD Bbox1_BBX-like 4 46 - -
Amo10g0100 156 MobiDBLite consensus disorder prediction 117 156 - -
Amo10g0100 156 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 150 - -
Amo10g0100 156 SMART bboxneu5 1 46 IPR000315 GO:0008270
Amo10g0100 156 MobiDBLite consensus disorder prediction 78 156 - -
Amo10g0100 156 Pfam B-box zinc finger 3 44 IPR000315 GO:0008270
Amo10g0100 156 PANTHER B-BOX TYPE ZINC FINGER PROTEIN 3 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0100 Amo-Chr10 1191053 1193745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0100 1 128 C2C2-CO-like Transcription Factor Family AT4G27310 39.024 6.16e-35 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo10g0100 zf-B_box 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0100 - - gmx:100805832 160.999