Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0093 ATGGAGCTAACGAGACATTTCATAGACGTAACCGTTTTGCTCTTACTATCCATGAACGTTGGAAATTCCAGAGACACTATCACACCCTCAGATCCCCTTAATGGACCAGAAACTTTAAGCTCTAATAATGGCATGTTCCACCTTGGATTCTTCACGCCAACAAACTCCTCCTACCTTGGAATCTGGTACATGTCCAACCCTCCTGTCGTGTGGGTTGCCAACAGAGACCAACCTATAAAGGATTCTTCTTCTTCTCTACTCCAAATATCTCAGGATGGAAACCTTGTTCTCATGGATAATGCAAACAACAGTAGGATTCTTGTTTGGTCAACAAACCTCTCCAATATTTCATCCAACACAACAGCGCAGCTTCTTAACACCGGCAACCTTGTGCTGCAAGAAAACACCACAGGAAGGTTCCTATGGCAGAGTTTCCAACACCCTTCAAACACGTTATTGCAGAAAATGCAGCTCAGCACAAACAAGATCACCGGTGAGGAAGTAAAACTCACTTCCTGGAGAACTCCTCAGGATCCATCCATTGGAGACTTCTCCTTGAGTCTCGAAGGCCTTAGTAGCCCTGAAATGGTCGTCTGGAAGGGAGTTCAACCTTACTGGCGTACCGGTCCGTGGAACGGTGTAACTTTTCTTGGAATACCTGGAGATAACATAAACAATCTTGATGGATTTTACTTGGAAAAATCGTATGATGATAACGGCACTTACTATCTTTCTTTCACCTTTGCAAATCAGTCCTTGTTGTTGATCTGTGTGTTAACAGCCGATGGAAACATGAAAGACTATTATTGGGATTATGGGAAGAGAAATTGGTCAATCGTATGGACAGCTATTAACTCAGAGTGTGATGTTTATGGAAAGTGTGGAGTATTTGGAATCTGTGATCCCACAAGTGAACCTATTTGTAGCTGCTTAACAGGGTTTGAACCAAAGAATGCTACTGAATGGAATCGGCAAAATTGGAGTAGCGGTTGTGTTAGGAAGAAAGCTCTTCAGTGTGAAGAGAATGGGTTTGTGAAGTTGCAGAATACTAAGACACCAGACTTTGTAGAGTGGTTCTCTCCTACTGAATATGATTGCAGAACTCAGTGCATTGGAAACTGCTCTTGTGAAGCATATGCATATGATGCTGGTATTGGTTGCATGCTATGGGGTGGGAACCTAATTGACATTCAAAGGTTCTCAAGTGGAGGAACAGATCTTTATATTCGGGTCCCCAATTCAGATCTTGGTAAAAAGAAAAATAATGTAACAGTAATCATCTCAGTTACAGTCACGGTAGGAGTGATTGTCCTTGTGTCATGCACATTTATCTTGTGGAAAAGAACTTCAAGGAAAGATAGAGCAAATTCCAGAGTTCAGGTCAGAATTCAGAAAAATGAGCTTCTTGAGCTTTCACAGTTTGAGTTTGAAAGGCTTGCTATAGCAACAAACAACTTTCACTTAGATAATAAGCTAGGACAAGGGGGTTTTGGACCAGTATATAAGGGTACATTGGAAGATGGGCAGGAAATAGCAGTTAAAAGGCTTTCAAGAGCATCTGGACAAGGGCTAGAAGAATTTATGAATGAGGTGTTGGTAATATCAAAGCTTCAACATCGAAATCTTGTCAGACTTCTTGGATGTTGTATAGAAAGAGATGAAAAGATTTTGATCTATGAATACATGCCAAATAGGAGTCTTGATGCATATATGTTTGATCCATCTAAACAGATTCTAAGTTGGGAACAACGTTTTGATATAATCGAAGGAATAGCTCGTGGTTTACTTTATCTTCACAGAGATTCTAGATTAAGGATTATACATAGAGATTTGAAGTTAAGCAATATATTACTTGATGGAGAATTAAATGCAAAAATTTCAGACTTTGGCATGGCAAAGATTTTTGGTTACACGGAAGCTGAGGCTAATACTCGAAGGGTTGTCGGAACATTTGGTTATATGCCACCGGAATACGTTATGGAAGGACTATTTTCAGAAAAATCCGATGTATTCAGTTTCGGTGTTTTATTATTGGAGATCGTTAGCAAGAGAAAAAATACTAGTTTTTATGAAGATGCAGAATCTCTAAGCCTTATTGGATTTGCATGGAAATTGTGGAATGATGATAAGATTACAGCTCTAATAGATCCAGAAGTAGCAAACATGAGTAGTCTTGCAGATATAATGAGGTGCATTCACATTGGGCTTTTGTGTGTGCAAGAACTTGCAAGGGATAGACCTACTATGACTGCAGTGATTTCAATGCTTAATAGTGAAACTGTTAATCTTCCTCTGCCGAAGCAGCCAGCATTCATGCATAGGCAGACAATGTTGGATATAGAGTCTTCTCATAGAAGTGATGGATCATATTCCATCAATTATATCAGCTTAACAAACATCCAAGGAAGAGATTCAAAATTAAAGCAACATGACTATATCAACTTGCCATCTTCATTGGGTTACATTGTATCTGTCCATTCATTTCATACTCGCTCATCTATCCTTCTCTGCATCTTCATGGAGCACTACCTATCCTTTCTACTATTATTCTTACTCTTCACTTCTGCCACTTCCTTAGACACCATCACCTCTTCTTATATCCTTAAACCCCCTCAAACTTTAACCTCCAAGGATGGTATGTTCCACCTTGGATTCTTCAACCTTACCACCAACTCATCAACATCATCTTACCTCGGAATCTGGTACATAACCAACCCCCCTGTCGTCTGGGTTGCTAACAGAGACCAACCTATCAAAGGTGATGATAGCGTAGCAGTGCTCAAGATATCCGAGGATGGAAACTATGCACGTAATAATGAGATCCTTTGGTCAACGAATGTGTCAAACATCGCATCCCCCAACACCACAAGTGCTCAGCTTCTTACCACCGGAAACCTCGTGTTGCAAGATAACGCCACAGGGACGATACTGTGGCAGAGTTTCCAACACCCCACAGACACGTTCCTGCAGAACATGAAGATTAGCGCCAACAGGATCTCCGGCAAGAAAGTAAACATAACCTCGTGGAGAACTCCTCATGATCCATCCACTGGAGACTTCTCTGTGAGCCTTGAACGCCTTAGTATCCCTGAAGCGTTCATCTGGAGAGGGGAGAGTCAACCTCACTGGCGAAGTGGCCCATGGAACGGTCAAATATTTATTGGGATACCTGACATGACCGCAAATTATATTGACGGGTTCTACATGAGTGGCAAAGATGAAGAGAGCAACGGCACTTACTATCTTTCTTATAGCTATGTAAATCATAATCTAAGGATGTTCGCGTTGGGTGCTGATGGAAACTTAAATGAATACTACTGGGATTATTCAAAGAAGCAATGGTCCATGATGTGGTCTGTTATTAACACTGAGTGCGGTGTTTATGGCAAGTGTGGAGTATTTGCAAGTTGCGACCCTAAAACTTCACATATCTGCACTTGTTTGAGAGGGTATGTTCCAAGGAATGCAGAGGAGTGGAACAAACAAAACTGGAGCAGCGGCTGTGTTAGGAAGACACCTGTGCAGTGTGAGAGTGAGAAAGTCATAAAAAATAATAGTAGTGATGAATCGGTAGCAGTAGAAGATGGGTTTGTGAAGCTTCAGAATACCAAGGTTCCAGACTATGCTGAGTGGTTGTCTTCCATTGACTTTGACTGCAGAACTGCGTGTTTGGGGAACTGCTCTTGCAAAGCGTATGCTTATGATGTTGGAATTGGTTGTATGCTGTGGAGTGGAAACTTGATTGACATACAGAGATTCTCAATGGGAGGAACCGATCTTTATATACGTGTTCCCTCTTCTGAGCTTGATGAGCAGAAGAAGAAAAATCATGCCTCAGTGATCATTGCAGTTACAGTCTCAGCAGTAGGAACTATTGGGATTTTGATTTGCGCGTTTATCCTGTGGAAAAGAAGAACTGCAATAGGAGAGAGAGCAAATTTCAGAATACCTACAATAAGCAACACAAAATACCCAAGCAAAGTCAAACTCCCGGAGCTTTCCCAATTTGAGTTTGAAAAGCTTGCAATTGGAACATTGGAAGATGGACTAGAAGTAGCAGTTAAAAGACTTTCAAGAGCTTCATATCAAGGACTAGAAGAATTTATGAATGAGGTTCTAGTAATATCAAAACTTCAGCACCGTAATCTTATGAGGATTTTGGTGTATGAATACATGCCAAATAAAAGTTTAGATGCATATCTGTTTGATTCATGTATGCAAGTATTAAATTGGGAAAAACGTTTTCATATTATTGAAGGAATAGCTCGAGGTTTACTTTATCTTCACAGAGACTCTCGACTAAGAATTATCCATAGAGATTTGAAGCTAAGCAATATATTACTTGACGAAGAGCTAAATCCAAAGATTTCAGATTTTGGTATGGGCAAAGATTTTTTTGGTTATATGTCACCAGAATATGCTATGGAAGGACTATTTTCAGAGAAATCTGATGTATTCAGCTTTGGTGTTTTACTACTAGAAATTGTCAGTAGAAGAAAGAACACTAAATTTTATGAAGATGCAGCATCATTGAGTCTTTTAGGATTTGCATGGAAATTGTGGAATGCTGATAACATTCCACCTCTGATAGATCCAGAGATATTAAATCCGATCTGCAATGAAGATATAAAGAGGTGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGAGATAGGCCTACAATGACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTTCTCCCAAGCAGCCAGCATTCGTGCAGAGGCAGACTCTGCTGGATATAGAGTCTTCTATGACAAGTGATGGATTATGCTCCATTAATAATGTGAGCCTAACAAATGTCCAAGGAAGATAA 4857 0.4021 MELTRHFIDVTVLLLLSMNVGNSRDTITPSDPLNGPETLSSNNGMFHLGFFTPTNSSYLGIWYMSNPPVVWVANRDQPIKDSSSSLLQISQDGNLVLMDNANNSRILVWSTNLSNISSNTTAQLLNTGNLVLQENTTGRFLWQSFQHPSNTLLQKMQLSTNKITGEEVKLTSWRTPQDPSIGDFSLSLEGLSSPEMVVWKGVQPYWRTGPWNGVTFLGIPGDNINNLDGFYLEKSYDDNGTYYLSFTFANQSLLLICVLTADGNMKDYYWDYGKRNWSIVWTAINSECDVYGKCGVFGICDPTSEPICSCLTGFEPKNATEWNRQNWSSGCVRKKALQCEENGFVKLQNTKTPDFVEWFSPTEYDCRTQCIGNCSCEAYAYDAGIGCMLWGGNLIDIQRFSSGGTDLYIRVPNSDLGKKKNNVTVIISVTVTVGVIVLVSCTFILWKRTSRKDRANSRVQVRIQKNELLELSQFEFERLAIATNNFHLDNKLGQGGFGPVYKGTLEDGQEIAVKRLSRASGQGLEEFMNEVLVISKLQHRNLVRLLGCCIERDEKILIYEYMPNRSLDAYMFDPSKQILSWEQRFDIIEGIARGLLYLHRDSRLRIIHRDLKLSNILLDGELNAKISDFGMAKIFGYTEAEANTRRVVGTFGYMPPEYVMEGLFSEKSDVFSFGVLLLEIVSKRKNTSFYEDAESLSLIGFAWKLWNDDKITALIDPEVANMSSLADIMRCIHIGLLCVQELARDRPTMTAVISMLNSETVNLPLPKQPAFMHRQTMLDIESSHRSDGSYSINYISLTNIQGRDSKLKQHDYINLPSSLGYIVSVHSFHTRSSILLCIFMEHYLSFLLLFLLFTSATSLDTITSSYILKPPQTLTSKDGMFHLGFFNLTTNSSTSSYLGIWYITNPPVVWVANRDQPIKGDDSVAVLKISEDGNYARNNEILWSTNVSNIASPNTTSAQLLTTGNLVLQDNATGTILWQSFQHPTDTFLQNMKISANRISGKKVNITSWRTPHDPSTGDFSVSLERLSIPEAFIWRGESQPHWRSGPWNGQIFIGIPDMTANYIDGFYMSGKDEESNGTYYLSYSYVNHNLRMFALGADGNLNEYYWDYSKKQWSMMWSVINTECGVYGKCGVFASCDPKTSHICTCLRGYVPRNAEEWNKQNWSSGCVRKTPVQCESEKVIKNNSSDESVAVEDGFVKLQNTKVPDYAEWLSSIDFDCRTACLGNCSCKAYAYDVGIGCMLWSGNLIDIQRFSMGGTDLYIRVPSSELDEQKKKNHASVIIAVTVSAVGTIGILICAFILWKRRTAIGERANFRIPTISNTKYPSKVKLPELSQFEFEKLAIGTLEDGLEVAVKRLSRASYQGLEEFMNEVLVISKLQHRNLMRILVYEYMPNKSLDAYLFDSCMQVLNWEKRFHIIEGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKISDFGMGKDFFGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTKFYEDAASLSLLGFAWKLWNADNIPPLIDPEILNPICNEDIKRCIHIGLLCVQELARDRPTMTAVVSMLNSETVNLPSPKQPAFVQRQTLLDIESSMTSDGLCSINNVSLTNVQGR* 1619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0093 1618 ProSiteProfiles PAN/Apple domain profile. 339 412 IPR003609 -
Amo10g0093 1618 SMART serkin_6 486 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0093 1618 ProSiteProfiles PAN/Apple domain profile. 1176 1265 IPR003609 -
Amo10g0093 1618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1436 1448 IPR008271 GO:0004672|GO:0006468
Amo10g0093 1618 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 846 1609 - -
Amo10g0093 1618 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 12 783 - -
Amo10g0093 1618 Pfam Protein tyrosine and serine/threonine kinase 487 755 IPR001245 GO:0004672|GO:0006468
Amo10g0093 1618 Pfam Protein tyrosine and serine/threonine kinase 1345 1570 IPR001245 GO:0004672|GO:0006468
Amo10g0093 1618 CDD B_lectin 30 148 IPR001480 -
Amo10g0093 1618 SUPERFAMILY alpha-D-mannose-specific plant lectins 898 1050 IPR036426 -
Amo10g0093 1618 CDD PAN_AP_plant 1172 1265 - -
Amo10g0093 1618 Gene3D Phosphorylase Kinase; domain 1 1307 1394 - -
Amo10g0093 1618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 606 618 IPR008271 GO:0004672|GO:0006468
Amo10g0093 1618 PANTHER - 846 1609 - -
Amo10g0093 1618 PANTHER - 12 783 - -
Amo10g0093 1618 Pfam S-locus glycoprotein domain 206 318 IPR000858 GO:0048544
Amo10g0093 1618 Pfam S-locus glycoprotein domain 1043 1154 IPR000858 GO:0048544
Amo10g0093 1618 Pfam D-mannose binding lectin 69 174 IPR001480 -
Amo10g0093 1618 Pfam D-mannose binding lectin 908 1010 IPR001480 -
Amo10g0093 1618 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 213 IPR036426 -
Amo10g0093 1618 Gene3D Phosphorylase Kinase; domain 1 445 561 - -
Amo10g0093 1618 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Amo10g0093 1618 CDD STKc_IRAK 492 757 - -
Amo10g0093 1618 Pfam Domain of unknown function (DUF3403) 1573 1618 IPR021820 GO:0004674
Amo10g0093 1618 Pfam Domain of unknown function (DUF3403) 758 803 IPR021820 GO:0004674
Amo10g0093 1618 CDD B_lectin 865 984 IPR001480 -
Amo10g0093 1618 SUPERFAMILY Protein kinase-like (PK-like) 1342 1571 IPR011009 -
Amo10g0093 1618 ProSiteProfiles Bulb-type lectin domain profile. 859 981 IPR001480 -
Amo10g0093 1618 CDD PAN_AP_plant 337 412 - -
Amo10g0093 1618 ProSiteProfiles Protein kinase domain profile. 486 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0093 1618 Gene3D Transferase(Phosphotransferase) domain 1 562 764 - -
Amo10g0093 1618 Gene3D Transferase(Phosphotransferase) domain 1 1395 1583 - -
Amo10g0093 1618 SMART blect_4 30 148 IPR001480 -
Amo10g0093 1618 SMART blect_4 865 984 IPR001480 -
Amo10g0093 1618 Gene3D - 19 146 IPR036426 -
Amo10g0093 1618 Gene3D - 854 982 IPR036426 -
Amo10g0093 1618 Pfam PAN-like domain 1194 1250 IPR003609 -
Amo10g0093 1618 Pfam PAN-like domain 339 397 IPR003609 -
Amo10g0093 1618 ProSiteProfiles Protein kinase domain profile. 1302 1586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0093 1618 SUPERFAMILY Protein kinase-like (PK-like) 472 788 IPR011009 -
Amo10g0093 1618 SMART ntp_6 339 411 IPR003609 -
Amo10g0093 1618 SMART ntp_6 1192 1264 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0093 Amo-Chr10 1113035 1125871 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0093 414 803 Receptor kinase-like Gene Family AT3G45860 48.878 5.76e-117 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0093 PK_Tyr_Ser-Thr 8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0093 - - adu:107468469 3078.12