Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0092 ATGGTTATGGGACTAAGTAGTCACTTTATAAACACACAAGTTTTGCTAACACTTTGCTTTAGTTTCTTCCTACATGATGCTGGAAGTTCCTTAGACACCATCACTTCCTCTTACATCCTTAAAGCCCCCGAAACTTTAAGCTCTAATGATGGTATGTTCCATCTAGGATTCTTCACCCCTACCAACTCCACCTTTTCCTACCTCGGAATCTGGTACATAACCAAACCTCCTTTGGTGTGGGTTGCCAACAGAGACCAACCAATAAAGGATTCTTCTTCTTCTTCCTCTGGTGTGCTCAAGATATCTAAAGATGGAAACCTTGTTCTGCTGAATTCACAAGATGACATCCTTTGGTCTACAAATGTGTCTAATATTTCATCTAACACAACGGCTAAGCTTCTGAACACCGGAAACCTTGTGCTGCAAGAAAACGCAACAGGAAGGATCCTATGGCAGTGTTTCCAACACCCCACAAACGCTTTCTTGCAGGGAATGGAACTCAGCACCGGTAACATCAGCGGCGGCCAGAGAACAAAACTCACCTCGTGGAAAAGTCATGAGGATGCATCCATTGGGGAATTCTCAATGAGTCTTGAACGCCTGAATATCCCGGAAGTGTTGGTGTGGAGAGGGAGCCAACCTCACTGGCGTAGTGGTCCATGGAATGGTCAAATATTTCTGGGGATACCTGACATGGCAACCAACTATCTTTTCGGGTTTTACTTAAGTCAAGATAACGGCAATACTAATTACTATCTTGCTTACAACTACGGAAATCATACTTTTCCTGTATACTACTTATTAAGTGTTGATGGAAATGTATACGAATTATCTTGGGATCATGAAAAGAGAGATTGGTTCATCTCCTGGTTAGCTATAAATTCAGATTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATTTGTGATCACAGGAGCTCTCCGATTTGCAGGTGTTTGAGAGGGTATAAGCCAAGGAATGATGAGGAATGGAGCAAACAGAACTGGAGCAGCGGTTGTGTTAGGAACGAACCTTTTCAGTGTGAGAGTGAGAGTGTAAAAAATAACAAACCAGATGGATTTGTGAAGATGCAGAATGCCAAGGTTCCAGCCTCTATCTTGTGGTCATATGCTGCTGAGGACGATTGCAAAGCTGAGTGCTTAGGCAACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGCTGCATGTCATGGATTGGAAGCTTAATTGATCTTCAGATATTCTCAACTGGAGGAACTGATCTTTACATTCGAGTTCCCTATGCAGAGCTAGGTGAAGACAAGAAAAATGTCACAGTGGTCATTGCAGAGTCAGTGATAGTAGGAACCACTATCATTCTCACCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGAGAGCAAAAACAAACTAAGGAGAGAAGACAATGACCTAGTAAAACTCCCAGAGCTTTCCCAATTTGAGTTTGAAAGACTTGTTGCTGCAACAAATAACTTCAATCTATCTAATAAGCTAGGAGAAGGAGGTTATGGACCAGTATATAAGGGAACATTGGAAGATGGACAGGAAATAGCAGTGAAAAGGCTTTCAAGATCATCCGGGCAAGGATATGAAGAATTTATGAATGAGGTTATGGTAATATCAAAGCTTCAACATCGTAATCTTGTTAGACTTTTTGGATGTTGTATAGAAGGAGAAGAGAAGATTTTGATCTATGAGTACATGCCAAACAAAAGTCTAGATGCATATATGTTTGATCAATCAAACCAGATACTGAATTGGGAAAAACGTTTTAGTATAATCGATGGAATAGCTCGGGGTTTACTTTATCTTCACAGAGATTCTAGACTGAGAATTATACATAGAGATTTGAAGTTGAGTAACATACTGCTTGATGAAGAGTTAAATCCAAAAATTGCGGATTTTGGCCTGGCAAAAATTTTTAGTCGAACCGAAGATGCAGTCAATACTAGAAGAGTTAGTTTATACAGCGGCTATATGTCACCAGAATATGCTATGGAAGGACTATTTTCAGAGAAATCTGATGTATTTAGCTTTGGTGTTTTGCTGTTGGAGATTGTGAGTAGAAGAAAAAATACCAGCTTTTGTGAAGATTCTAAATCTTTGAGCCTCTTGGGATTTGCATGGAATTTATGGAATGCTGATAACACTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAACAAAGAAGATATAATGAGGTGCATACATATTGGTCTTTTGTGTGTGCAAGAACTTGCAAGAGATAGGCCTACAATGACTGCAGTGGTTTCAATGCTTAATAGTGAGACTGTTAATCTTCCTTCTCCCAAGCAGCCAGCATTCGTTCAGAGGCAGACTCTGCTGGATATAGAGTCTTCTATGACAAATGATGGATTATGCTCCATTAATAATATAGCTCTTTGTTTAATGCCTATTTGGGTTGAAATTTTATTCCTTATGCAGCACGAAACTAATCAAATGTCAGCACACTGTATTACTTGGAATTTATGGAATGCAGATAACATTGCATCTCTAATAGATCCAGAAATATCAAGTTCATGCAACAAAGAAGATATAATGAGGTGCATACATATTGGTCTTCTATATGTACAAGAGCTTGCAAGAGATAGACCTACAATGACTTCAGTAATTTCAATGCTTAATACACTTTTTTCCACTTGCACTTCCTTGGACACCATCTCCTCTTCCTACATCCTTAATGCCTCCGAAACTTTAAGCTCCAGTAATGGTTTGTTCCACCTTGGATTTTTCACCCCTACTAACTCATCAACCTTTTCATCCTACCTCGGTATCTGGTTCATGACCAAACCCTCTGTCGTATGGGTTGCCAACAGAAACCAACCAATAACTGATTCTTCATCTTCTGGGCTGCTCAAGATATCAAAGGATGGAAACCTTGTTGTGATGAATTCAAAAAGTGTGGCCCTTTGGTCAACAAAAGCCTCCAATATTTCATCTAACACATTAGCTAAGCTTCTAAACAACGGCAACCTTCTGTTGCAAGAAAACTCCACAGGAAGGATCCTATGGCAGAGTTTCCAACACCCCACAAACACTTTCCTGCAGGGAATGGAACTCGGTACCGGTAACATTAGCGGGGAGAGAATAAAACTGACTTCATGGAGAAGCCCCCAGGATCCATCCATTGGAGAATTCTCAGTGAGTCTTGAACACCTGAATATCCCGGAAGTGATGATATGGAGAGGGAGCCAACCTCACTGGCGCAGTGGTCCATGGAATAGTCAAAAGTTTCTTGGCATACCTGACATGAGAAGCAACTTTCTTTCAGGGTTTTACTTAGGTGTGGAAGACATGGATAATGGAATTACTAATTACTATCTTGCTTACAACTACTCAAACAATCCTGAGTCTGTATACTACTACATGTTGAGTACTGATGGAAACCTACATGAAACATATTGGGATCATGAAAAGGGAGAATGGCTTGACTCGTGGTTAGCTATAAATTCAGAGTGTGATGTGTATGGCAAGTGTGGAGAGTTTGGAATTTGTGATTCCACGAATTCTCCGATTTGCAGCTGTTTGAGAGGGTATAAGCCAAGGAATCCTGAGGAGTGGAATAAACAGAACTGGAGCAGAGGTTGTATTAGGAAGGAACCTTTTCAGTGTGAGAATGATGGATTTGTGAAGTTGCAGAATGCCAAGGTTCCAGCCTCTATCAAGTGGTTGTCTACCGCGATTGGAAACGACTGCAAAGGCCAGTGCTTGGGGGACTGCTCCTGCACAGCATATGCATATGATGCTGGCACTGGTTGTATGGTGTGGACTGCAAACTTAACTGACATACAAAGCTTCTCAGCTGGAGGAATTGATCTTTACATTCGAGTTCCCAATTCAGAGCTTGGTGAAGACAAGAAAAATGTCACAGTGGTCATTGCAGTGCCAGTCATAGTAGGAGCTGCTATCATTCTCATCTGTGCTTATATCTTCTGGAAAAGGATTCAAATCAGAGAGAAAGCGAAAAACAAACCAAGGAGAAAAGACAATGACCTAGTGAAATTCCCAGAGCTTTCCCAATTTGAGTTTAAAAGACTTGTTGCTGCAACAAATAACTTTAATCTATCAAATAAGCTAGGGGAAGGAGGTTATGGCCCAGTATATAAGGGAACATTGGAAGATGGACAGGAAATAGCAGTTAAAAGGCTTTCAAGATCATCCGGGCAAGGATACGAAGAATTTATGAATGAGGTTATGGTAATATCAAAGCTTCAACATTTTAATCTTGTTAGACTTTTTGGATGTTGTATAGAAGGAGATGAGAAGATTTTGATCTATGAGTACATGCCAAACAAAAGTCTAGATGCATATATGTTCGATCAATCACAAATACTGAATTGGGAAAAACGTTTCAGTATAATTGAAGGAATAGCAAGGGGCTTGCTTTACCTTCACAGAGATTCTAGACTAAGAATTATACATAGAGATTTAAAGATGAGTAACATATTGCTTGATGAAGAGCTGAATCCAAAAATTGCCGATTTTGGCATGGCAAAGATTTTTACACGGACTCAAGATGTGGTCAATACTAGAAGGGTTGTTGGAACATACGGTTATATGTCACCAGAATACGTTATACAAGGACTATTTTCGGAAAAGTCTGATGTATTTAGCTTTGGTGTTTTACTGCTGGAAATTGTTAGTAAGAGAAAAAATAGCAGCTTTTATGAAGATGCTGAATCTTTGAATCTTTTAGGATTTGCATGGAATTTATGGAATGCAGATAACATTGCATCTCTTATAGATCCAGAAATATCAAGCTCATGCAACAAAGAAGACATAATGAGGTGCATACATATTGGTCTTTTATGTGTACAAGAGCTTGCAAGAGATAGGCCTACAATGACTTCAGTGATTTCAATGTTTAAAAGTGAGACAATCAATCTTCCTCCTCCAAAACAGCCAGCATTCATTCTAAGGCAGACTATAATTGATATAGAATCTTCTCTTACAAATAAGGAATTAGGCTCTATCAATAAT 5040 0.3968 MVMGLSSHFINTQVLLTLCFSFFLHDAGSSLDTITSSYILKAPETLSSNDGMFHLGFFTPTNSTFSYLGIWYITKPPLVWVANRDQPIKDSSSSSSGVLKISKDGNLVLLNSQDDILWSTNVSNISSNTTAKLLNTGNLVLQENATGRILWQCFQHPTNAFLQGMELSTGNISGGQRTKLTSWKSHEDASIGEFSMSLERLNIPEVLVWRGSQPHWRSGPWNGQIFLGIPDMATNYLFGFYLSQDNGNTNYYLAYNYGNHTFPVYYLLSVDGNVYELSWDHEKRDWFISWLAINSDCDVYGKCGEFGICDHRSSPICRCLRGYKPRNDEEWSKQNWSSGCVRNEPFQCESESVKNNKPDGFVKMQNAKVPASILWSYAAEDDCKAECLGNCSCTAYAYDAGTGCMSWIGSLIDLQIFSTGGTDLYIRVPYAELGEDKKNVTVVIAESVIVGTTIILTCAYIFWKRIQIRESKNKLRREDNDLVKLPELSQFEFERLVAATNNFNLSNKLGEGGYGPVYKGTLEDGQEIAVKRLSRSSGQGYEEFMNEVMVISKLQHRNLVRLFGCCIEGEEKILIYEYMPNKSLDAYMFDQSNQILNWEKRFSIIDGIARGLLYLHRDSRLRIIHRDLKLSNILLDEELNPKIADFGLAKIFSRTEDAVNTRRVSLYSGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSRRKNTSFCEDSKSLSLLGFAWNLWNADNTASLIDPEISSSCNKEDIMRCIHIGLLCVQELARDRPTMTAVVSMLNSETVNLPSPKQPAFVQRQTLLDIESSMTNDGLCSINNIALCLMPIWVEILFLMQHETNQMSAHCITWNLWNADNIASLIDPEISSSCNKEDIMRCIHIGLLYVQELARDRPTMTSVISMLNTLFSTCTSLDTISSSYILNASETLSSSNGLFHLGFFTPTNSSTFSSYLGIWFMTKPSVVWVANRNQPITDSSSSGLLKISKDGNLVVMNSKSVALWSTKASNISSNTLAKLLNNGNLLLQENSTGRILWQSFQHPTNTFLQGMELGTGNISGERIKLTSWRSPQDPSIGEFSVSLEHLNIPEVMIWRGSQPHWRSGPWNSQKFLGIPDMRSNFLSGFYLGVEDMDNGITNYYLAYNYSNNPESVYYYMLSTDGNLHETYWDHEKGEWLDSWLAINSECDVYGKCGEFGICDSTNSPICSCLRGYKPRNPEEWNKQNWSRGCIRKEPFQCENDGFVKLQNAKVPASIKWLSTAIGNDCKGQCLGDCSCTAYAYDAGTGCMVWTANLTDIQSFSAGGIDLYIRVPNSELGEDKKNVTVVIAVPVIVGAAIILICAYIFWKRIQIREKAKNKPRRKDNDLVKFPELSQFEFKRLVAATNNFNLSNKLGEGGYGPVYKGTLEDGQEIAVKRLSRSSGQGYEEFMNEVMVISKLQHFNLVRLFGCCIEGDEKILIYEYMPNKSLDAYMFDQSQILNWEKRFSIIEGIARGLLYLHRDSRLRIIHRDLKMSNILLDEELNPKIADFGMAKIFTRTQDVVNTRRVVGTYGYMSPEYVIQGLFSEKSDVFSFGVLLLEIVSKRKNSSFYEDAESLNLLGFAWNLWNADNIASLIDPEISSSCNKEDIMRCIHIGLLCVQELARDRPTMTSVISMFKSETINLPPPKQPAFILRQTIIDIESSLTNKELGSINN 1680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0092 1680 CDD B_lectin 910 1030 IPR001480 -
Amo10g0092 1680 CDD PAN_AP_plant 354 429 - -
Amo10g0092 1680 SUPERFAMILY alpha-D-mannose-specific plant lectins 943 1061 IPR036426 -
Amo10g0092 1680 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 223 IPR036426 -
Amo10g0092 1680 Pfam Domain of unknown function (DUF3403) 775 812 IPR021820 GO:0004674
Amo10g0092 1680 SUPERFAMILY Protein kinase-like (PK-like) 484 773 IPR011009 -
Amo10g0092 1680 Gene3D Transferase(Phosphotransferase) domain 1 1449 1649 - -
Amo10g0092 1680 Gene3D Transferase(Phosphotransferase) domain 1 579 785 - -
Amo10g0092 1680 SMART blect_4 910 1030 IPR001480 -
Amo10g0092 1680 SMART blect_4 37 157 IPR001480 -
Amo10g0092 1680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1492 1504 IPR008271 GO:0004672|GO:0006468
Amo10g0092 1680 ProSiteProfiles Bulb-type lectin domain profile. 31 154 IPR001480 -
Amo10g0092 1680 SMART serkin_6 1373 1635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0092 1680 SMART serkin_6 503 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0092 1680 Pfam Protein tyrosine and serine/threonine kinase 504 773 IPR001245 GO:0004672|GO:0006468
Amo10g0092 1680 Pfam Protein tyrosine and serine/threonine kinase 1374 1640 IPR001245 GO:0004672|GO:0006468
Amo10g0092 1680 ProSiteProfiles Protein kinase domain profile. 503 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0092 1680 Pfam S-locus glycoprotein domain 1088 1202 IPR000858 GO:0048544
Amo10g0092 1680 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Amo10g0092 1680 PANTHER - 15 811 - -
Amo10g0092 1680 PANTHER - 834 896 - -
Amo10g0092 1680 PANTHER - 899 1679 - -
Amo10g0092 1680 SUPERFAMILY Protein kinase-like (PK-like) 1358 1662 IPR011009 -
Amo10g0092 1680 ProSiteProfiles Bulb-type lectin domain profile. 904 1027 IPR001480 -
Amo10g0092 1680 Pfam D-mannose binding lectin 78 184 IPR001480 -
Amo10g0092 1680 Pfam D-mannose binding lectin 953 1056 IPR001480 -
Amo10g0092 1680 Gene3D Transferase(Phosphotransferase) domain 1 819 901 - -
Amo10g0092 1680 ProSiteProfiles EGF-like domain profile. 1169 1205 IPR000742 -
Amo10g0092 1680 ProSiteProfiles Protein kinase domain profile. 1373 1647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0092 1680 CDD B_lectin 37 157 IPR001480 -
Amo10g0092 1680 CDD STKc_IRAK 509 774 - -
Amo10g0092 1680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Amo10g0092 1680 Gene3D Phosphorylase Kinase; domain 1 465 578 - -
Amo10g0092 1680 Gene3D Phosphorylase Kinase; domain 1 1334 1448 - -
Amo10g0092 1680 ProSiteProfiles PAN/Apple domain profile. 1224 1298 IPR003609 -
Amo10g0092 1680 SMART ntp_6 356 428 IPR003609 -
Amo10g0092 1680 SMART ntp_6 1224 1297 IPR003609 -
Amo10g0092 1680 CDD PAN_AP_plant 1221 1298 - -
Amo10g0092 1680 CDD STKc_IRAK 1379 1643 - -
Amo10g0092 1680 ProSiteProfiles PAN/Apple domain profile. 348 429 IPR003609 -
Amo10g0092 1680 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 15 811 - -
Amo10g0092 1680 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 834 896 - -
Amo10g0092 1680 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 899 1679 - -
Amo10g0092 1680 Gene3D - 902 1028 IPR036426 -
Amo10g0092 1680 Gene3D - 27 154 IPR036426 -
Amo10g0092 1680 Pfam PAN-like domain 1224 1283 IPR003609 -
Amo10g0092 1680 Pfam PAN-like domain 356 414 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0092 Amo-Chr10 1097613 1108276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0092 841 896 Receptor kinase-like Gene Family AT4G23230 41.071 5.01e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0092 PK_Tyr_Ser-Thr 1.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0092 - - adu:107468469 2108.95