Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0087 ATGGCTACTGTGTTTTACCAACACGTGTCTATTCTGTTTTTGCTCTGTTTCTTCTTCTTCCTCTGTTTCTGTGCTATGTTTTCTGCTGCAGCTGCCAGGTCCAGCATCACAACCGCTCAGTTCATTAGGAACCGTGACAATCTCGTCTCAGATGGAAACAACTTCGAAATGGGTTTCTTCACTTATGATAATTATAACAACACTTACGTTGGGATTTGGTACTACACCATTCCTCAACCATACGTCATATGGGTCGCTAACAGAGACTACCCCATCAAAGGCGATGGTGGCGCTATAACTATCCAACAAGATGGAAACTTGGTTATCTTCGATGAACAAAAGCGCAAAGTATGGTCAAGTAATGTCACGATTTCTGCGAATAACAAGACCACTGAAGCTGTTCTTGGTGATGATGGAAACCTCGTACTTACACTCACAGATTCTGGGAAAAAGGTATGGCAGAGCTTTGAGGATCCAAGCGATACGTATTTACCGGGTATGAAGGTTCCAGCGAATCCTTCAAAGGGGAAGAAGAACTTTGTCTTCACTTCATGGAAATCAGCCAAGGACCCTTCAACTGGGAAATACACAATGGGGGTTGATCCTGAGAGTTTGCCTCAGATTGTGGTTTGGGAAGCAGGGGAAAGAAGGTGGAGGAGTGGTTACTGGAATGGAGGAGTCTTCACTGGTGTGGACATGACAGGAAGCGTGCTAGAGGGTTTCACTATTAACAAAGGCGATAAAAGCTCTTACTTTTCTTATAGCGTGCCCAATGGTAGTGATAAGGTAAGGTTTCAGATAACTTGGGATGGGTATGAGAAAGAGTTGAAGTGGGATCCTTCTCAGAAACAATGGAATGAGACACAGAGAGGGCCTTCTAATGATTGTGAGGTTTACAACAAGTGTGGTAGTTTCTCAGCTTGTGATATTAGTTCAGGTTCACCTGTTTGTAAGTGCTTAAAAGGGTTTCAACAAAGAGGTGGTGTTGGTGGTGGGTGTAAGAGGGTGACACCACTCAAAGCTGAAAAGACAACCTCTGAGGTTGGTGTCAAAGAAGATGGATTCCAGAGGCGTCGCTGCATGAGGCTGCCCGATTTTGCGCAGCAAGGAAACCCCCTTGGCGCTGACAACTGTGAGAGCTTTTGCTTGAAGAATAGTTCTTGCACTGCTTATGCTAATGTTAGTGGGATTGGGTGCATGGTTTGGTATGGGGAGTTGGTTGATCTTCAAGATTTTAGAGGAAATGTAGGAGAAACACTTTTCATTCGTTTAGCTGCTTCTGATTTAGTTACAGATGATGGAGGGAAAAAGAACAAGATTGTGATAGTAACAGCTATTATAGCAGGATTAATCTCTATAGGGATTTTTGTATTTATAGTATGGAGGTGCAAGGCAAAACTCAAACTCAAAGTTTCGTCCGCTTCATGTCGCAAGAATAGTGATGTAATACCAATTTATGATGCAAGCAAGAGTAAAGAGATGTCGACAGAATTTTCAGCATCAGCTGATCTTAGTTTGGAGGGTAATGAGCTAAGTGGACCAGAACTTCCACTTTTCAATTTTAATTGCATTTCCATAGCCACAGACAACTTTTCACAAGGAAATAAGCTTGGGGAAGGGGGTTTCGGTCCTGTTTATAAGGGAAAGCTTCCAAGTGGAGAACAAATAGCTGTCAAAAGGCTTTCAAGACATTCCTGCCAAGGTTTGGAGGAGTTCAAGAATGAAATGATGCTGATAGCCAAACTACAACACAGAAATTTGGTTAGACAAATGGGTTGCTCTATTCGCGGTGAAGAAAAATTGCTTGTATATGAGTACATGCCGAACAAAAGCTTGGATCGCTTTTTATTTGATCCGGTCAAGCAAACAGAGTTAGACTGGGCAAGACGCTATGATATAATTGAAGGCATTGCAAGAGGACTACTTTATCTACATCGAGATTCAAGACTAAGAATAATTCATCGAGATCTAAAAGCAAGCAATATTTTATTGGACGAAAACATGAACCCAAAAATCTCAGACTTCGGGCTGGCCAGGATATTTGGTGGAAACCAGAACGAAGGCAATACAACCAGAGTGGTTGGTACATATGGTTATATGGCTCCAGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCCGATGTATATAGTTTTGGTGTATTACTATTAGAGATTGTGAGTGGTCGGAGGAACACTAGCTTTCGTCACTCAGATGACACAAGTCTCATTGGATATGCATGGCATCTTTGGAATGAAGGCAGAGCAATGGAGCTTGTAGACCCTTGCATACGTGAATCAAGTCCTAAAGACAAAGCTTTGAGGTGCATAAACATAGGAATGTTGTGTGTGCAAGATTCAGCATCTCATAGACCAAACATGTCCAATGTAGTGTTGATGCTAGAAAGTGAGACAACCACTCTTCCATTACCTTCACAACCTTTGGTCACTTCCATGAGGAGATCTGAGGACAGAGAATTTCATATGGAAGGTCTTGATGTTTCAAATGATTTAACTGTCACAATGGTGGTTGGAAGATAG 2541 0.4199 MATVFYQHVSILFLLCFFFFLCFCAMFSAAAARSSITTAQFIRNRDNLVSDGNNFEMGFFTYDNYNNTYVGIWYYTIPQPYVIWVANRDYPIKGDGGAITIQQDGNLVIFDEQKRKVWSSNVTISANNKTTEAVLGDDGNLVLTLTDSGKKVWQSFEDPSDTYLPGMKVPANPSKGKKNFVFTSWKSAKDPSTGKYTMGVDPESLPQIVVWEAGERRWRSGYWNGGVFTGVDMTGSVLEGFTINKGDKSSYFSYSVPNGSDKVRFQITWDGYEKELKWDPSQKQWNETQRGPSNDCEVYNKCGSFSACDISSGSPVCKCLKGFQQRGGVGGGCKRVTPLKAEKTTSEVGVKEDGFQRRRCMRLPDFAQQGNPLGADNCESFCLKNSSCTAYANVSGIGCMVWYGELVDLQDFRGNVGETLFIRLAASDLVTDDGGKKNKIVIVTAIIAGLISIGIFVFIVWRCKAKLKLKVSSASCRKNSDVIPIYDASKSKEMSTEFSASADLSLEGNELSGPELPLFNFNCISIATDNFSQGNKLGEGGFGPVYKGKLPSGEQIAVKRLSRHSCQGLEEFKNEMMLIAKLQHRNLVRQMGCSIRGEEKLLVYEYMPNKSLDRFLFDPVKQTELDWARRYDIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEGNTTRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVSGRRNTSFRHSDDTSLIGYAWHLWNEGRAMELVDPCIRESSPKDKALRCINIGMLCVQDSASHRPNMSNVVLMLESETTTLPLPSQPLVTSMRRSEDREFHMEGLDVSNDLTVTMVVGR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0087 846 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 2 846 - -
Amo10g0087 846 Pfam PAN-like domain 351 409 IPR003609 -
Amo10g0087 846 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Amo10g0087 846 SMART serkin_6 531 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0087 846 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 846 - -
Amo10g0087 846 ProSiteProfiles PAN/Apple domain profile. 350 425 IPR003609 -
Amo10g0087 846 SUPERFAMILY Protein kinase-like (PK-like) 516 826 IPR011009 -
Amo10g0087 846 Gene3D Phosphorylase Kinase; domain 1 507 606 - -
Amo10g0087 846 CDD B_lectin 48 159 IPR001480 -
Amo10g0087 846 CDD PAN_AP_plant 349 425 - -
Amo10g0087 846 PIRSF SRK 5 846 IPR024171 GO:0004674
Amo10g0087 846 Pfam D-mannose binding lectin 82 186 IPR001480 -
Amo10g0087 846 Gene3D Transferase(Phosphotransferase) domain 1 607 809 - -
Amo10g0087 846 Pfam S-locus glycoprotein domain 218 325 IPR000858 GO:0048544
Amo10g0087 846 Pfam Protein tyrosine and serine/threonine kinase 533 799 IPR001245 GO:0004672|GO:0006468
Amo10g0087 846 SMART blect_4 39 159 IPR001480 -
Amo10g0087 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Amo10g0087 846 ProSiteProfiles Protein kinase domain profile. 531 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0087 846 CDD STKc_IRAK 537 802 - -
Amo10g0087 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 191 IPR036426 -
Amo10g0087 846 Gene3D - 28 156 IPR036426 -
Amo10g0087 846 SMART ntp_6 350 424 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0087 Amo-Chr10 1059169 1063094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0087 434 814 Receptor kinase-like Gene Family AT4G23230 52.618 2.14e-130 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0087 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0087 - - aprc:113869342 1187.17