Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0085 ATGCACATACCAGTTTTGCTGCTACTAACACTTAGCTTCTGCCATGTTGCGAATTCCTTATTAGACACCATAACCTCCTCAAATTACATCCTTAAGGACCCTGAAACCTTAAGCTCCAACAACACTTTGTTCCACCTAGGATTCTTCACCCCTTCTAACTCATCAACCTTGTCCTACCTCGGAATTTGGTACATGTCCAAATCCTCTGTGGTCTGGGTTGCCAACAGAAACCAACCTATAAAGGATTCTTCTTCAGGGCATCTCAAAATATCTGAGGATGGAAACCTTKWTGTCATGAACCAACAGAAGCAGATTCTTTGGTCAWCAAACATCACAAATATTACATCCAACACAACGGCACAGCTTCAGAACACCGGAAACCTTGTGTTGCAAGAAATCACCACAGGAAGGATCCTTTGGCAGAGTTTCCAGCACCCTGCAGATACTTTCTTGCAGAAAATGGAGCTTAGCACCAATGAGATTACCGGCCAGAGAGTGAAACTCACCTCATGGAGAACTCCTAATGATCCATCCATAGGAGACTTCACTATGAGTCTTGAACCCCTTAACATCCCTCAAGTGTTCATATGGAAAGGAACTCAACCTCATTGGCGAAGCGGTCCATGGAACGGTCAAGTTTTTATTGGGATACCTACTATGAACACGAACTATCTTGACGGGTTCTCCTTAGATGGTGAAGGTCAAACCAACGGCACTTACTACCTCTCATACAACTATGCGAATGTGTCAATGATGTATGTGTTGAGTTCTGATGGAAACTTTCACGAAACCTATTGGGATTATGCAAAGAGAGATTGGATTGTGGACTGGTCTGCTGTAAGCTCTGTGTGTGATGTTTATGGAGAGTGTGGTCCCTTTGGAAGCTGTGATCCTAAAAATTCACCTATCTGCAGCTGTTTGAGAGGGTTTGAGCCAAAGAATGCTCAAGAGTGGAATAAACAAAACTGGAGCAGCGGTTGTGTGAGGAAGAAGCCTCTGCAGTGTGATGAGAGAGTYAGAAATAATAGGAGTAGTGATGGGTTTGTGAAGCTGCAAAATGTCAAGGTTCCAGATTTTTCACAGTGGTTGTCTTCCATTGCTTATGATTGCAGAACTGAGTGCTTGGCAAATTGCTCTTGCATTGCATAYGCTTATGATTCTGGCATTGGCTGCATGTTATGGTGTGGAAACTTGATTGACATACAGCAGTTCTCAATGGGAGGAATTGATCTTTACATTCGAGTTCCCTCTTCGGAACTTGAGAAGAAAAATCACACACTGATCATAGTTCTTTCGGTCATAATAGCAATGGCTCTTGTTGTGGCTTGTGCATATATCTTGAGGAAAAGGGCAATCAGAGGAGTGAAAGCACTTCAAAGAATTCAGAGAAGAAGTTATGTTAATGATACAAGTCAAGTTGAACTTCCGGAGAATTCACTATTTGAGCTTGAAAAGCTTGCTACTGCAACAAACAACTTCCACTCCAATAATAAGCTAGGACAAGGTGGTTTTGGATCTGTATATAAGGGTAGATTGGAAAATGGACAGGAGATAGCAATTAAAAGACTTTCAAAAACATCTGGACAAGGTGTAGAAGAATTTATGAATGAAGTTATGGTAATATCAAAACTTCAACATCGAAATCTTGTCAGACTTCTTGGATGTTGCATCGAAAGAGATGAAAAGATTTTGATCTATGAATACCTACCAAACAGAAGTTTGGATGCACATATATTTGATCCGCCTAAACAAAAGGTATTAAATTGGGAAAAACGTTTTAACATACTYGAAGGAATCGCTCGAGGTYTACTTTATCTTCACAGAGATTCTAGATTAAAGATTATACACAGAGACTTGAAATTAAGTAATATATTGTTAGATGACGAGTTAAATCCGAAAATATCAGATTTTGGTATGGCAAAAATTTTTGAGAATACTGAAAATGAGGCCAATACCAGAAGAATTGTTGGAACGTTTGGTTATATATCACCAGAATATGCTCTACAAGGACTATTTTCAGAAAAATCAGACGTATTTAGTTTCGGAGTTTTACTTTTGGAGATTATTAGTGGCAGAAAAAATAGCAGCTTTTATGAGAATGTTGAATCTTTGAGCCTTTTGGGGTTTGCATGGAAATTGTGGAGAAATGACAACATAGCATCACTAATAGATCCAGAAATATCAAATCCAAGCAATAAARAAGACATAACGAGGTGCATACATATTGGTCTTTTGTGTGTACAAGAACTTGCAAGCTATAGGCCTACTATGACTGCAGTAATTTCGATGCTTAATAGTGAGACTGTTAATCTTYCTCCTCCCAAACAGCCAGCATTCATTCAAATACAGACWATGATAGATGTAGAGTCTTCTCTTAGAAATGATGGAGCATGTTCCATCAATTACATGAGTCTAACAAACATCCAAGGAAGATAA 2436 0.3908 MHIPVLLLLTLSFCHVANSLLDTITSSNYILKDPETLSSNNTLFHLGFFTPSNSSTLSYLGIWYMSKSSVVWVANRNQPIKDSSSGHLKISEDGNLXVMNQQKQILWSXNITNITSNTTAQLQNTGNLVLQEITTGRILWQSFQHPADTFLQKMELSTNEITGQRVKLTSWRTPNDPSIGDFTMSLEPLNIPQVFIWKGTQPHWRSGPWNGQVFIGIPTMNTNYLDGFSLDGEGQTNGTYYLSYNYANVSMMYVLSSDGNFHETYWDYAKRDWIVDWSAVSSVCDVYGECGPFGSCDPKNSPICSCLRGFEPKNAQEWNKQNWSSGCVRKKPLQCDERVRNNRSSDGFVKLQNVKVPDFSQWLSSIAYDCRTECLANCSCIAYAYDSGIGCMLWCGNLIDIQQFSMGGIDLYIRVPSSELEKKNHTLIIVLSVIIAMALVVACAYILRKRAIRGVKALQRIQRRSYVNDTSQVELPENSLFELEKLATATNNFHSNNKLGQGGFGSVYKGRLENGQEIAIKRLSKTSGQGVEEFMNEVMVISKLQHRNLVRLLGCCIERDEKILIYEYLPNRSLDAHIFDPPKQKVLNWEKRFNILEGIARGLLYLHRDSRLKIIHRDLKLSNILLDDELNPKISDFGMAKIFENTENEANTRRIVGTFGYISPEYALQGLFSEKSDVFSFGVLLLEIISGRKNSSFYENVESLSLLGFAWKLWRNDNIASLIDPEISNPSNKXDITRCIHIGLLCVQELASYRPTMTAVISMLNSETVNLXPPKQPAFIQIQTMIDVESSLRNDGACSINYMSLTNIQGR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0085 811 Gene3D - 16 144 IPR036426 -
Amo10g0085 811 ProSiteProfiles PAN/Apple domain profile. 335 416 IPR003609 -
Amo10g0085 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Amo10g0085 811 CDD STKc_IRAK 499 765 - -
Amo10g0085 811 Pfam PAN-like domain 343 401 IPR003609 -
Amo10g0085 811 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Amo10g0085 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Amo10g0085 811 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Amo10g0085 811 Pfam Domain of unknown function (DUF3403) 766 811 IPR021820 GO:0004674
Amo10g0085 811 Pfam D-mannose binding lectin 70 172 IPR001480 -
Amo10g0085 811 PANTHER - 6 801 - -
Amo10g0085 811 SUPERFAMILY Protein kinase-like (PK-like) 479 792 IPR011009 -
Amo10g0085 811 SMART ntp_6 343 415 IPR003609 -
Amo10g0085 811 ProSiteProfiles Protein kinase domain profile. 493 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0085 811 Pfam S-locus glycoprotein domain 204 314 IPR000858 GO:0048544
Amo10g0085 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 6 801 - -
Amo10g0085 811 Gene3D Phosphorylase Kinase; domain 1 454 568 - -
Amo10g0085 811 SMART serkin_6 493 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0085 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 211 IPR036426 -
Amo10g0085 811 CDD PAN_AP_plant 332 416 - -
Amo10g0085 811 CDD B_lectin 28 146 IPR001480 -
Amo10g0085 811 Pfam Protein tyrosine and serine/threonine kinase 495 764 IPR001245 GO:0004672|GO:0006468
Amo10g0085 811 SMART blect_4 28 146 IPR001480 -
Amo10g0085 811 Gene3D Transferase(Phosphotransferase) domain 1 569 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0085 Amo-Chr10 1028879 1031905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0085 462 779 Receptor kinase-like Gene Family AT4G11530 57.276 1.91e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0085 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0085 - - ahf:112714694 1120.53