Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0081 ATGCCGGTCAGCTTAGATTGTTCTGCTGTTCTTAGCTTCGTGAACAAATTGATGAATAAGTCAAACAGTCAAAAGCACTCAGCTTGTTCGACATTACCCTCTAAACTCACAACAACAATCACACACTATTCTTTACTTTCCACAAACATGAGAATCTTCATCACTCACCTTAACTACCTCATCATCATTGTTACTAGCTTCTTCATCATTCCATCAACCTCTTCGGATACTTTAACCGGAACACAAAACCTCACAACCAACCAAACGCTATTATCACAAAACCAATCCTTCGTGCTGGGCTTCTTCAGAGGTTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACCATAATTTGGGTTGCAAACAGAGACAACCCCATTGACAACTCTACAGGCTATCTCAAGATCGGAGAAAACGGAAACTTTGTCCTTCTCAATTCACCCGGCAACCCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCATCAGACAAGACCAATAATAACTACTTATGGCAGAGCTTTGATTACCCAACGGATACCGTGATACCGGGGATGAAGATCGGTTGGAATTTGGACACAGGAACGGAGAAGCATTTAACATCATGGAAGATCAAGGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGCTTTCCTCAGGAGAAACCAAACTATAATATTCCGAACTGGTCCTTGGAATGGTGAGAGATTCAGTGGGGTCCCTGAGATGAAAAACAACACCGGTCTCGACTTCAATTTCTCTTATGATGAGCATGGCGTGTGGTACTCTTTTTCCGTTACAAACCTTTCCTTGTTGTCGAGGGTAATTGTGACATCTGATTCTGATGGCAAGGCGCTTCAACGCTACATGTTGATACAAGGAAGTTGGAACAAGTTCTGGTACGAACCAGCTGATGAATGCGATTACTATAGACAGTGTGGTCCATATGGAGTGTGTGACAAGAATGCTTCACCGATTTGCAAGTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACATGAGAGATGGATCTAATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACGAGCAGTGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTCATGTGGCTTGATCAACTCATTGACATGAGTGTCTTCGCTACCTATGGCCAAGATCTCTTTGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCATAGAGTAGTTCTGGCTACTGGTATCTCACTTTGTGCACTTGTTTTAGTTTTGGGATTGGTCGCTATTTGTTACTTAAAGAAGAAGAGAAAACAAAAATCAAGAGGTGATGAAAGGAACATGGATGATCTGGAATTGCCAATGTTTAATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGCAGATTGATTGAAGGCCAAGAAATTGCTGTAAAAAGATTGTCAGAAGACTCTAGACAAGGAGTTACAGAGTTTGAAAATGAAGTCAAATTAATGGTCAAACTCCAACACCGAAATCTTGTTCGATTGCTTGGTTGCTGCATTGAGAAGAATGAGAAAATATTGGTGTATGAATATATGGAAAATAGAGGCCTTGATTCCATTTTATTCGACGAATCAAAAGGTCTCTTGCTTAACTGGGAGAAACGTTTCAATATTATATATGGAATAGCAAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGACAAGTAATATATTACTAGATATTAAAATGAATCCAAAGATATCAGACTTTGGAATTGCTAGAATTTTTGATAACGATCAAACACAAGCAAAAACAGTAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATATTATGGGTGGAAACTTCTCAGAAAAATCTGATGTTTTTAGCTTTGGAGTTATAATATTAGAAATTATAACTGGAAAGAAGAATAGAAGGTTTTCCAATAATAATGATGAACTGAATCTCTTGGAAAATGTATGGAGACACTGGCATGAAGGAACTATATTGAAATTAATTGATCCATCCATTGGAAATTTATATACAGAATCTGAAATTGTAAGATGCATACATATTGGACTCTTATGTGTTCAAGAATGTGCAGAAGATAGACCAACAATGTCCTTAGTGATCTTATTGTTGAGAAGTGAAGCCCCATCAATGCCAAATCCTAAAATTCCTGGATTTTCAGCAAAAAAAAATTATTCAGAGACTGATTTATCTTCAAGTAAGCAAGATGAATCATGGAGTGTGAATCAAGTCACACTCACATTATTAAATGCTAGGTAG 2589 0.3897 MPVSLDCSAVLSFVNKLMNKSNSQKHSACSTLPSKLTTTITHYSLLSTNMRIFITHLNYLIIIVTSFFIIPSTSSDTLTGTQNLTTNQTLLSQNQSFVLGFFRGSNTNYYLGIWYNNINPQTIIWVANRDNPIDNSTGYLKIGENGNFVLLNSPGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSSDKTNNNYLWQSFDYPTDTVIPGMKIGWNLDTGTEKHLTSWKIKGEDPSSGDYTLKIDYHGLPEAFLRRNQTIIFRTGPWNGERFSGVPEMKNNTGLDFNFSYDEHGVWYSFSVTNLSLLSRVIVTSDSDGKALQRYMLIQGSWNKFWYEPADECDYYRQCGPYGVCDKNASPICKCMQGFRPKNQEAWNMRDGSNGCVRNTVLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLDQLIDMSVFATYGQDLFVRLAAADIGSTSSNKNHRVVLATGISLCALVLVLGLVAICYLKKKRKQKSRGDERNMDDLELPMFNFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAVKRLSEDSRQGVTEFENEVKLMVKLQHRNLVRLLGCCIEKNEKILVYEYMENRGLDSILFDESKGLLLNWEKRFNIIYGIARGLLYLHQDSRFRIIHRDLKTSNILLDIKMNPKISDFGIARIFDNDQTQAKTVRVVGTYGYMSPEYIMGGNFSEKSDVFSFGVIILEIITGKKNRRFSNNNDELNLLENVWRHWHEGTILKLIDPSIGNLYTESEIVRCIHIGLLCVQECAEDRPTMSLVILLLRSEAPSMPNPKIPGFSAKKNYSETDLSSSKQDESWSVNQVTLTLLNAR* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0081 862 CDD STKc_IRAK 549 811 - -
Amo10g0081 862 SUPERFAMILY Protein kinase-like (PK-like) 526 812 IPR011009 -
Amo10g0081 862 Pfam PAN-like domain 390 455 IPR003609 -
Amo10g0081 862 Gene3D Phosphorylase Kinase; domain 1 504 618 - -
Amo10g0081 862 CDD B_lectin 84 200 IPR001480 -
Amo10g0081 862 PANTHER - 60 860 - -
Amo10g0081 862 Gene3D Transferase(Phosphotransferase) domain 1 619 822 - -
Amo10g0081 862 Pfam D-mannose binding lectin 122 226 IPR001480 -
Amo10g0081 862 CDD PAN_AP_plant 386 470 - -
Amo10g0081 862 Gene3D Hepatocyte Growth Factor 385 466 - -
Amo10g0081 862 Pfam Protein kinase domain 544 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0081 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Amo10g0081 862 ProSitePatterns Protein kinases ATP-binding region signature. 549 571 IPR017441 GO:0005524
Amo10g0081 862 ProSiteProfiles Protein kinase domain profile. 543 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0081 862 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 60 860 - -
Amo10g0081 862 SMART serkin_6 543 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0081 862 PIRSF SRK 47 862 IPR024171 GO:0004674
Amo10g0081 862 ProSiteProfiles PAN/Apple domain profile. 390 470 IPR003609 -
Amo10g0081 862 SMART ntp_6 390 469 IPR003609 -
Amo10g0081 862 ProSiteProfiles Bulb-type lectin domain profile. 75 194 IPR001480 -
Amo10g0081 862 Pfam Domain of unknown function (DUF3403) 816 862 IPR021820 GO:0004674
Amo10g0081 862 SMART blect_4 81 200 IPR001480 -
Amo10g0081 862 SUPERFAMILY alpha-D-mannose-specific plant lectins 108 265 IPR036426 -
Amo10g0081 862 Gene3D - 70 197 IPR036426 -
Amo10g0081 862 Pfam S-locus glycoprotein domain 259 369 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0081 Amo-Chr10 917739 933733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0081 496 862 Receptor kinase-like Gene Family AT4G23150 50.532 1.33e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0081 Pkinase 7.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0081 - - aip:107621495 1657.11