Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0077 ATGAGAGTCTTCTTCACTCACCTTAACTCCCTCATCATCATTCTTATTAGCTTCTTCTTCTTCATTACTTCATCAACCTCTTTCGATACTTTAACCGGAACACAAATCCTCAAAACCAACCAAACCTTGTTGTCAGAAAACCAGACCTTCGTTCTAGGCTTCTTCAGAGGTTCCAACACCAAATATTACCTCGGAATATGGTACAACAACATCAATCCTCAAACAATAGTTTGGGTTGCAAACAGAGACAATCCCATTGACAACTTCACAGGCCATCTCAAGATCGGAGACAACGGAAACTTTGTCCTTCTCAATTCATCCGGCAACCCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCAGTTATCCAGCTCCTCGATACCGGCAACCTTGTTCTCAAAGATTTATCAGACACGACAAATAATAACTACTTGTGGCAGAGCTTCGAATACCCAACGGATACCTTGTTACCGGGGATGAAGGTCGGTTGGAACCTGGACACAGGAACGGAGAAGCACTTAACATCATGGAAGGTCGAAGGTGAAGACCCTTCAAGCGGTGACTACACTTTGAAGATAGATTACCATGGTTTACCTGAGGCCCTCCTCAGGAGAAACCAAACTATAATATACCGAACTGGTCCTTGGAACGGTGAGAGATTTAGTGGGATCCCAGGGATGAAAGACAACACCAATGATCTCAAGTACAATTTCACTTATGATGAGCATGGGGTGTGGTTCTCTTTCTCCGTTACAGAACCTTCCTTGTTGTCGAGGATAATTCTGTCATCTGATTCTGATGGCCAGTATCAACGCTACATGTGGATACAAGGAAGATGGAACAAGTTCTCGTACACACCAAAGGATCCATGCGATTACTATAGACACTGTGGTCCGTATGGAGTGTGTGAGAATGATGCTTCCCCGATTTGCACTTGTATGCAGGGGTTCAGGCCTAAGAACCAAGAAGCTTGGAACTTGAGAGATGGGTCTGATGGGTGTGTGAGGAACACGGTTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGCACATGAAGCTGCCGGAGACGAGCAGTGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTCATGTGGTTTGGCCAACTCTTTGACATGAATGTCCACCGTCCAGGCGGTCAAGATCTCTATGTCAGATTGGCAGCTGCTGATATAGGATCTTCTAGCTCCAACAAGAATCATAGAGCAGTTCTGGCTATTGGCATCACACTTAGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTTGTTACTTAAGGAAGAAGAGACAACAAAGTTCTAGAGGTGACCAAAGGAACATGGATGATCTAAAATTGCCAATGTTTAATTTTGATACCTTAATGATGGCTACAAACAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAGGGGTAGATTGATTGAAGGTCAAGAAATTGCTATAAAAAGGTTATCAGAAAATTCTGGACAAGGAATTAATGAATTTAAAAATGAAATCAAATTAATTGCCAAACTCCAACATCGAAATCTAGTCCGATTACTTGGTTGCTGCATTGAGAAGAATGAGAAGATGGTGGTCTATGAATATATGGAAAATAGAGGACTTGATTCCATTTTGTTTGACAAATCAAAAAATCTCTTGCTTAATTGGGAGAAGCGTTTTAATATTATATGTGGAATAGCTAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGATAAGTAATATATTACTAGATATTGAAATGAATCCAAAGATATCAGACTTTGGAATGGCTAGAATTTTTGACAAAGATCAAACACAAGAAAATACAGTAAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATATTATGGATGGAAATTTTTCAATAAAATCTGATGTTTATAGCTTTGGAGTTATGGTATTGGAAATTATAACTGGGAAGAAAAATAGAAGATTTTCCGGGGATAACGACGAATTAAATCTTCTGGAAAATGTTTGGAGGCGTTGGCATGAAGGAACTATATTGACATTGGTTGATTCATCCATTGGCAATTCATATGCAGAATCAGAAGTCTTAAGATGCATACATGTTGGTCTCTTATGTGTCCAAGAATGTGCAGAAGATAGACCAACAATGTCTTCAGTGGTTTTAATGTTGAGTAGTGAAGCTGCATTAATGCCACGTCCTAGAAATCCTGGGTTTTTTCTAAGAAGGAATCATGAAGAAACATCCTCAAGAAATCAAGACAAAACAGAGAGTGTAAATCAAGTTACTGTCACATTACTAAATGCTAGGTAG 2442 0.3956 MRVFFTHLNSLIIILISFFFFITSSTSFDTLTGTQILKTNQTLLSENQTFVLGFFRGSNTKYYLGIWYNNINPQTIVWVANRDNPIDNFTGHLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVIQLLDTGNLVLKDLSDTTNNNYLWQSFEYPTDTLLPGMKVGWNLDTGTEKHLTSWKVEGEDPSSGDYTLKIDYHGLPEALLRRNQTIIYRTGPWNGERFSGIPGMKDNTNDLKYNFTYDEHGVWFSFSVTEPSLLSRIILSSDSDGQYQRYMWIQGRWNKFSYTPKDPCDYYRHCGPYGVCENDASPICTCMQGFRPKNQEAWNLRDGSDGCVRNTVLNCSTDKFLHLEHMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWFGQLFDMNVHRPGGQDLYVRLAAADIGSSSSNKNHRAVLAIGITLSALVLVLGLVAICYLRKKRQQSSRGDQRNMDDLKLPMFNFDTLMMATNNFSQDNKLGEGGFGSVYRGRLIEGQEIAIKRLSENSGQGINEFKNEIKLIAKLQHRNLVRLLGCCIEKNEKMVVYEYMENRGLDSILFDKSKNLLLNWEKRFNIICGIARGLLYLHQDSRFRIIHRDLKISNILLDIEMNPKISDFGMARIFDKDQTQENTVRIVGTYGYMSPEYIMDGNFSIKSDVYSFGVMVLEIITGKKNRRFSGDNDELNLLENVWRRWHEGTILTLVDSSIGNSYAESEVLRCIHVGLLCVQECAEDRPTMSSVVLMLSSEAALMPRPRNPGFFLRRNHEETSSRNQDKTESVNQVTVTLLNAR* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0077 813 Gene3D Phosphorylase Kinase; domain 1 457 571 - -
Amo10g0077 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 219 IPR036426 -
Amo10g0077 813 Gene3D Transferase(Phosphotransferase) domain 1 572 774 - -
Amo10g0077 813 Pfam Domain of unknown function (DUF3403) 769 813 IPR021820 GO:0004674
Amo10g0077 813 CDD B_lectin 34 153 IPR001480 -
Amo10g0077 813 ProSiteProfiles Protein kinase domain profile. 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0077 813 CDD PAN_AP_plant 339 423 - -
Amo10g0077 813 Pfam Protein tyrosine and serine/threonine kinase 498 764 IPR001245 GO:0004672|GO:0006468
Amo10g0077 813 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 812 - -
Amo10g0077 813 SMART blect_4 34 153 IPR001480 -
Amo10g0077 813 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Amo10g0077 813 PANTHER - 13 812 - -
Amo10g0077 813 Gene3D Hepatocyte Growth Factor 338 419 - -
Amo10g0077 813 Pfam S-locus glycoprotein domain 212 322 IPR000858 GO:0048544
Amo10g0077 813 Gene3D - 23 150 IPR036426 -
Amo10g0077 813 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Amo10g0077 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Amo10g0077 813 Pfam D-mannose binding lectin 75 179 IPR001480 -
Amo10g0077 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Amo10g0077 813 ProSiteProfiles PAN/Apple domain profile. 343 423 IPR003609 -
Amo10g0077 813 SUPERFAMILY Protein kinase-like (PK-like) 481 794 IPR011009 -
Amo10g0077 813 Pfam PAN-like domain 343 408 IPR003609 -
Amo10g0077 813 CDD STKc_IRAK 502 767 - -
Amo10g0077 813 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Amo10g0077 813 SMART ntp_6 343 422 IPR003609 -
Amo10g0077 813 SMART serkin_6 496 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0077 Amo-Chr10 812038 821316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0077 449 813 Receptor kinase-like Gene Family AT4G23150 51.058 1.20e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0077 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0077 - - aip:107621495 1366.29