Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0075 ATGAGAGTCTTCTTCACTCACCTTAACTCCCTCATCATCATTCTTATTAGCTTCTTCTTCATCACTTCATCAACCTCTTTCGATGCTTTAACCGGAACACAAATCCTCACAACCAACCAAACCTTGTTGTCAGAAAACCAAACCTTCGTTCTAGGCTTCTTTAGAGATTCCAACACCAACTATTACCTCGGAATATGGTACAACAACATCATTCCTCAAACCATAGTTTGGGTTGCAAACAGAGACAACCCTGTTGACAACTCTACCGGCTATCTCAAGATCGGAGACAACGGAAACTTTGTCCTCCTCAATTCATCCGGGAACCCCGCATGGTCCTCCAACCAAACCAGCGCCAAGAATCCTGTTCTCCAGCTCCTCGATACCGGTAACCTTGTTCTCAAAGATTCAGAGCAGAGCAATAACTACCTATGGCAGAGCTTCGATTACCCAACAGATACTTTGCTACCTGGGATGAAATTGGGTTGGAACTTCGACACAGGAGTTGAGAAGCACTTAACATCGTGGAAGGTCACAGGTGAAGACCCTTCTTCCGGTGACTACACTTACAAGCTAGATTACCGCGGTTTACCTGAGATTTTTCTCAGGAGAAAGCAGACTATCATATACCGAACTGGTCCTTGGAATGGTGAGAGATTCAGCGGGGTTCCAACGATGAACGCCGATACTCATTCCATTGTGTTCAGCTTCTCCGATGACGCGCACGGCGTGTTCTACTATTTCTCCATCGGGAACGCTTCTTTGTTATCGAGGCTAACGGTGACCTCAGATTCAGACGGAGAACTTCAACGGTGGACGTGGACAGAGAGCAGCGAATCTTGGAACGAGTTCTGGTACGCACCGGCGGATCAATGCGACCATTACAGGGAGTGTGGTCCGTACGGAGTGTGTGACAGTAATGCATCGCCGGTTTGCACATGTATGAAAGGGTTCAGTCCTAAGAACCCTCAGGCTTGGAATCTGAGAGATGGATCTGGCGGGTGTGTGAGGAACACGGGTTTGAATTGTTCGACTGACAAGTTCTTGCATCTTGAGAACATGAAGCTGCCGGAGACAAGCAGCGTGTTTATGAATAAGAGTATGACACTTGATGAATGTGGGAGTTTGTGTAAGAGGAATTGTTCATGCACTGCATATGCAAACATCGATATCAGAAATGGAGGAAGTGGCTGTGTCATGTGGCTTGGCCAACTCTTTGACATGAGAGTCAACGGTATGGATGGCCAAGATCTATATGTCAGATTGGCAGCTGCTGATATAGGATCTACTAGCTCCAACAAGAATCACAGAGCAGTTCTGGCTATTGGCATCACACTTGGTGCACTTGTTTTAGTTTTGGGATTGGTTGCTATTCGTTACTTAAGGAAGAAGAGACGACAAAGTTCTAGAGGTGACGAAAGGAACATGGATGATCTGAAATTGCCAATGTTTGATTTTGATACCCTATCGATGGCTACAAATAATTTCTCTCAAGATAATAAACTTGGAGAAGGAGGCTTCGGTAGTGTTTATAAGGGTAGATTGATTGAAGGTCAAGAAATTGCTGTAAAAAGGTTATCAGAAAATTCTGGACAAGGAATTAATGAATTTAAAAATGAAATCAAATTAATTGCCAAACTCCAACATCGAAATCTAGTCCGATTACTTGGTTGCTGCATTGAGAAGAATGAGAAGATGGTGGTCTATGAATATATGGAAAATAGGGGACTTGATTCCATTTTGTTTGACAAATCAAAAAATCTCTTGCTTAATTGGGAGAGGCGCTATAATATTATATATGGAATAGCTAGAGGACTTCTTTATTTGCATCAAGATTCAAGATTTCGAATTATTCATAGAGATCTCAAGATAAGCAATATATTATTAGATATTGAAATGAATCCAAAGATATCAGACTTTGGAATGGCCAGAGTTTTTGACAAAGATCAAATACAAGAAAAAACAGCAAGAGTTGTTGGAACATATGGTTATATGTCTCCTGAATATATTATGGATGGAAACTTTTCAATAAAATCTGATGTTTATAGCTTTGGAGTCATGGTATTGGAAATTATAACTGGAAAAAGAAATAGATTTTCCGGTGATAACGACAAATTGAATCTTCTGGAAAATGTTTGGAGACGTTGGCATGAAGGAACTATATTGACATTGGTTGATTCATCCATGGGCAATTCATATACAGAATCAGAAGTTTTAAGATGCATACATGTTGGTCTCTTATGTGTTCAAGAATGTGCAGAAGATAGACCAACAATGTCTTCAGTGATTTTAATGTTGAGTAGTGAAGCTGCATTAATGCCATGTCCAAAAAATCCTGGATTTTTTCTAAGAAGGAATCATGCAGAAACATCTTCAAGAAATCAAGATAAAACAGAGAGTGTAAATCAAGTTAGTGTTACATTACTAAATGCTAGGTAG 2436 0.4072 MRVFFTHLNSLIIILISFFFITSSTSFDALTGTQILTTNQTLLSENQTFVLGFFRDSNTNYYLGIWYNNIIPQTIVWVANRDNPVDNSTGYLKIGDNGNFVLLNSSGNPAWSSNQTSAKNPVLQLLDTGNLVLKDSEQSNNYLWQSFDYPTDTLLPGMKLGWNFDTGVEKHLTSWKVTGEDPSSGDYTYKLDYRGLPEIFLRRKQTIIYRTGPWNGERFSGVPTMNADTHSIVFSFSDDAHGVFYYFSIGNASLLSRLTVTSDSDGELQRWTWTESSESWNEFWYAPADQCDHYRECGPYGVCDSNASPVCTCMKGFSPKNPQAWNLRDGSGGCVRNTGLNCSTDKFLHLENMKLPETSSVFMNKSMTLDECGSLCKRNCSCTAYANIDIRNGGSGCVMWLGQLFDMRVNGMDGQDLYVRLAAADIGSTSSNKNHRAVLAIGITLGALVLVLGLVAIRYLRKKRRQSSRGDERNMDDLKLPMFDFDTLSMATNNFSQDNKLGEGGFGSVYKGRLIEGQEIAVKRLSENSGQGINEFKNEIKLIAKLQHRNLVRLLGCCIEKNEKMVVYEYMENRGLDSILFDKSKNLLLNWERRYNIIYGIARGLLYLHQDSRFRIIHRDLKISNILLDIEMNPKISDFGMARVFDKDQIQEKTARVVGTYGYMSPEYIMDGNFSIKSDVYSFGVMVLEIITGKRNRFSGDNDKLNLLENVWRRWHEGTILTLVDSSMGNSYTESEVLRCIHVGLLCVQECAEDRPTMSSVILMLSSEAALMPCPKNPGFFLRRNHAETSSRNQDKTESVNQVSVTLLNAR* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0075 811 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Amo10g0075 811 Gene3D Hepatocyte Growth Factor 340 421 - -
Amo10g0075 811 SUPERFAMILY Protein kinase-like (PK-like) 480 791 IPR011009 -
Amo10g0075 811 SMART ntp_6 342 421 IPR003609 -
Amo10g0075 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 215 IPR036426 -
Amo10g0075 811 Gene3D - 23 147 IPR036426 -
Amo10g0075 811 CDD STKc_IRAK 501 765 - -
Amo10g0075 811 SMART blect_4 33 150 IPR001480 -
Amo10g0075 811 Pfam PAN-like domain 342 407 IPR003609 -
Amo10g0075 811 SMART serkin_6 495 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0075 811 Pfam S-locus glycoprotein domain 209 321 IPR000858 GO:0048544
Amo10g0075 811 CDD B_lectin 33 150 IPR001480 -
Amo10g0075 811 Pfam Domain of unknown function (DUF3403) 767 811 IPR021820 GO:0004674
Amo10g0075 811 PANTHER - 12 809 - -
Amo10g0075 811 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Amo10g0075 811 ProSiteProfiles PAN/Apple domain profile. 342 422 IPR003609 -
Amo10g0075 811 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 809 - -
Amo10g0075 811 Pfam Protein tyrosine and serine/threonine kinase 497 762 IPR001245 GO:0004672|GO:0006468
Amo10g0075 811 Gene3D Transferase(Phosphotransferase) domain 1 571 772 - -
Amo10g0075 811 Pfam D-mannose binding lectin 74 176 IPR001480 -
Amo10g0075 811 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Amo10g0075 811 Gene3D Phosphorylase Kinase; domain 1 469 570 - -
Amo10g0075 811 CDD PAN_AP_plant 340 422 - -
Amo10g0075 811 ProSiteProfiles Protein kinase domain profile. 495 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo10g0075 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Amo10g0075 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0075 Amo-Chr10 781562 784731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0075 432 783 Receptor kinase-like Gene Family AT4G23190 52.342 1.08e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo10g0075 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0075 - - aip:107621495 1313.9