Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0034 AAGCTTAAATTGACGCTGCTTAGTCTTCATGCTTTTCTGGATGATGCTGAGGAAAAGCAGATCAAGATTGCTTCCGTGAAGGCATGGCTTGATGAACTCACTCAAGCTCTTTTCGACGCCGATGACTTGATCGATGACATCGCCACCGAAGCTCTCCGTCGCAAAGTGGAAGCCCGCTATCATCAAACTGTCAGTTCTAAGGTGCGAAAGGTCCTCTCCTCTCCTTTCAAGTGGCCTTACCGAGAGATTAATTCCAAGATGCAGAAGTTGTTTGAAAGACTAGAGCATTTTGCACAGAGAGCACACAACCTTCCATTGGAAAAAGGTGTTTCTGGCAATGTTTGGCGTGCAACACCTACAAATTCTGCTTTTGATGATTCTGCTATTTGTGGAAGAAATGATGAAAAACAGAATCTTAAAGAGTATTTAATATCAGAAGATGCCGCTGATGATGGTGGCAATAAAATAGGAGTGCTTGCCATTGTTGGCATGGGAGGGCTCGGGAAAACGACCCTGGCTAAACTCTTATACAATGATGCTCAAGTTAATGAAAAGTTTGATGTGAAAGCRTGGGCATCTGTCTCMAAAGATTTTGATGTTGTCAAGTTGGCAAAATCTCTTCTTGAATCTGTCACATCTGCAGCAACAACTTTGGATAACTTCGATACCTTGCGAGCAGAATTGCAAAAGAAGTTGTCGGATAAAAGATTTCTGCTTGTGTTGGATGATATATGGAATGCACGGTATGTTGATTGGACCAATTTGATGCACATTTTTAATGTTGGKCAAATGGGAAGCAAAATCATTGTTACAACWCGACATCARAATRTTGTGGATATTGTAAAAGCTATGCGGACYTGCMATCTGGAACCACTGGCAAATGAAGATTGTTGGACTTTACTTTCCAAACATGCATTTAGARCACCCAAATGCACTGAACTGTCATCCAACCTTGAAGAAATTGGTAGAAAAATTGCCCAAAAGTGTGGTGGCTTGCCATTAGCTGCGGTTGCTGTGGGGAGTCTTCTTAGCACAAAGTTATCAACCGAGCAGTGGAGCAAAGTGTTAAACAGCAACATTTGGCATCTGACAGGGGACGAGGTGCAACCAGCTCTTTTATTGAGCTATCATTTCCTTCCAGCTTCTTTGAAACAATGCTTTGCTTATTGTGCAATTTTCCCAAAGAACTCGAAGCTGCAAAAAGAGAAGTTAGTTCAGCTATGGATGGCACAGGGATTTGTTTTTGTGTCCCAAAATGAGAAAAGCATTGAAGAAGTAGGCGGTGAATACTTTGATGAACTAGTGGCAAGGTCATTGATACTACGTTCTGCGGGTGGGGAACACTTTGAAATGCATGACCTCATCAACGATTTGGCAACCATGGTTTCTTCCCCATATTGTAAGAGGCATGACAATGAAATGCAACTCAGAAATCTAAACAAAATTCGTCATTTATCTTATGATAAAAGTATGTTTAACCATTTTGGCGAACTTGATTCCCTTCATGGATTGAAAGGCTTMCGTACACTCACAGCATTACCGTTTGAATTTAACTTAMTGKTATGGGGCCATCACTTAGCAAATGGAGTATTGCATGAGTTGTTRGTAGCATTGAAACAGTTGCGGGTGTTATCMCTGTMAGACTACMGGAATATCACTGTTTTGCCGAATTCTATTGGCGATTTAAAGCATTTGCGATACCTAGATCTATCTTGCACTCGAATTGAAAGGTTGCCTTCTGCAATATGCAAGCTCTACAATCTACAGACCTTGTTGTTAWCTTRTTGTAAAGATCTTACTGAGTTGCCTGAGGAGATGGGAAAATTGGTGAATCTACGCCACCTTGCTATTGATTATTGTTGGGCTCTTACTAAGTTGCCTGAAGAGATGGGAAAATTGGTGAATCTACGCTGCCTTGATATTGAAGGTACTAAATTGCAGGAGATGTCCGTAGAAATAGCCAAACTAGAAAATCTGCAAACTCTGAGTGATTTTATTGTCAGCAAACAACAACATGGACTGAAGCTTGCAGAAATGAGAAAATTTCCCCATTTACAAGGTCAACTCTGCATCTCAAAACTAGAAAATGTTATTGATCCGTCTGATGCTTGTCAAGCCAATTTGAAGGAGAAAAACCAAATTGAGGAGTTATCATTGGAATGGAGTTATTCCATTTTGGAAGACGACTCCCATCAAGTTGTACTTGAACATCTGCAGCCCTCAACAAATGTGAAGAAACTGAGTGTTGAATGCTACGGTGGATCTACTTTCCCAAGTTGGCTGGGTGATTCCTCATTTGGCAACATTGTAAGTTTGAGGATTGAAGAATGTCATCATTGTTCTTCATTGCCACCTCTTGGAAGACTACATAGTCTAAAAGAACTCTTCATTTCGGGTACGAGATCAGTGAAGACTATTGGGTCTGAATTTTACGGAGGTAATTCCCCTTCATTCCAACCGTTTCCCTCCTTGGAGACTTTGAGTTTTGGGTCGATGGAAGAATGGGAGGAATGGAACATGATAGATGGTATAATTACTGAGTTTCCCCGTCTATCAAAGCTATCTCTGAGAAGGTGTCCGAAGCTGAAAGGAAATTTACCCAGCAATCTTCCTTGCTTGGTTACACTTGATGTAAAGGATTGTTGTGTACTTGAATCAGAGTTTTCAGGAGAAGTGGATAACAGAAACATAATGAGACCATTGAATGTATTCAATTTTAACTCTCTTCAACAATTATCTCTCTATCATATTCCTTTTCTGATGTCCTTCCCCAACAATGGTTTGCCTAAAGCGTTAAAGACACTTTCTATCGAATATTGTGAGAGCCTTGAATTCCCAACTCATGAGTTCCTTCATAGTTGCAAGGCACTTGAGGATCTCTACATATCGAGTAGCTGTTGCTCGCTGACGTCATTTCCCTTAGGTTCTCTCCCTGTGCTCAAGAGTCTTAAGCTTTGGGGTTGTAAAAAATTGAAATCAATTTCAATTTTGGAAGAAGCAGCAGCAATCCAGTCTCTCATGTTTCTTGAACATCTCGAAGTATATGGATGTCCTGAACTGGAGTCGATTTCGTCCACTCCTAACCTGAGTTATTTTTCGGTAAAGAATTGCGACAAGATTACTTCATTACCAGAACCTATTAATAATCTCACTGGCCTACATTCATTATATATTTGTGATGTTCCAAATTTGGAATCCATTGCAGAAGAGGGTTTGCCTATCAATTTAACGACACTAGGTGTCGGCAATGAAGAAGGGGTTTACAGCAATACAGCTATCACCAAGTGGGGCTTGGACCGACTCACTTCTCTTTCACGTTTGTGGATTAAAGGTGAGTATCTGGTTAAGAAGCTGATGGAAATACAAGTGCCCCTGTTGCCCAATTCTCTTGGGATGCTGGATATAGAAGGAGCACGTGAAATACAACATTTGGATGGCAAGTGGCTTCAGCATCTCACCTCTCTTGAAGATATCGAGTTGAGTGAATGTGACAAGCTCAAGTCATTGCCAACAGAAGGGCTGCCTTCCTCAATTTCACGTCTACATATTTGGAGATGCCCAATGTTAAAAGCAAAATCAAACTACTCTTACAAAAAGTTTCGTCGACTAAAAAAACCAAGATTTCTGTAG 3630 0.405 KLKLTLLSLHAFLDDAEEKQIKIASVKAWLDELTQALFDADDLIDDIATEALRRKVEARYHQTVSSKVRKVLSSPFKWPYREINSKMQKLFERLEHFAQRAHNLPLEKGVSGNVWRATPTNSAFDDSAICGRNDEKQNLKEYLISEDAADDGGNKIGVLAIVGMGGLGKTTLAKLLYNDAQVNEKFDVKAWASVSKDFDVVKLAKSLLESVTSAATTLDNFDTLRAELQKKLSDKRFLLVLDDIWNARYVDWTNLMHIFNVGQMGSKIIVTTRHQNXVDIVKAMRTCXLEPLANEDCWTLLSKHAFRXPKCTELSSNLEEIGRKIAQKCGGLPLAAVAVGSLLSTKLSTEQWSKVLNSNIWHLTGDEVQPALLLSYHFLPASLKQCFAYCAIFPKNSKLQKEKLVQLWMAQGFVFVSQNEKSIEEVGGEYFDELVARSLILRSAGGEHFEMHDLINDLATMVSSPYCKRHDNEMQLRNLNKIRHLSYDKSMFNHFGELDSLHGLKGXRTLTALPFEFNLXXWGHHLANGVLHELLVALKQLRVLSLXDYRNITVLPNSIGDLKHLRYLDLSCTRIERLPSAICKLYNLQTLLLXXCKDLTELPEEMGKLVNLRHLAIDYCWALTKLPEEMGKLVNLRCLDIEGTKLQEMSVEIAKLENLQTLSDFIVSKQQHGLKLAEMRKFPHLQGQLCISKLENVIDPSDACQANLKEKNQIEELSLEWSYSILEDDSHQVVLEHLQPSTNVKKLSVECYGGSTFPSWLGDSSFGNIVSLRIEECHHCSSLPPLGRLHSLKELFISGTRSVKTIGSEFYGGNSPSFQPFPSLETLSFGSMEEWEEWNMIDGIITEFPRLSKLSLRRCPKLKGNLPSNLPCLVTLDVKDCCVLESEFSGEVDNRNIMRPLNVFNFNSLQQLSLYHIPFLMSFPNNGLPKALKTLSIEYCESLEFPTHEFLHSCKALEDLYISSSCCSLTSFPLGSLPVLKSLKLWGCKKLKSISILEEAAAIQSLMFLEHLEVYGCPELESISSTPNLSYFSVKNCDKITSLPEPINNLTGLHSLYICDVPNLESIAEEGLPINLTTLGVGNEEGVYSNTAITKWGLDRLTSLSRLWIKGEYLVKKLMEIQVPLLPNSLGMLDIEGAREIQHLDGKWLQHLTSLEDIELSECDKLKSLPTEGLPSSISRLHIWRCPMLKAKSNYSYKKFRRLKKPRFL* 1210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0034 1209 Gene3D - 375 461 IPR036388 -
Amo10g0034 1209 Gene3D Ribonuclease Inhibitor 892 1023 IPR032675 -
Amo10g0034 1209 Pfam Rx N-terminal domain 1 59 IPR041118 -
Amo10g0034 1209 Gene3D - 1 101 - -
Amo10g0034 1209 PRINTS Disease resistance protein signature 231 245 - -
Amo10g0034 1209 PRINTS Disease resistance protein signature 329 343 - -
Amo10g0034 1209 PRINTS Disease resistance protein signature 868 884 - -
Amo10g0034 1209 PRINTS Disease resistance protein signature 158 173 - -
Amo10g0034 1209 SUPERFAMILY L domain-like 898 1190 - -
Amo10g0034 1209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 390 IPR027417 -
Amo10g0034 1209 Gene3D Ribonuclease Inhibitor 466 621 IPR032675 -
Amo10g0034 1209 PANTHER OS05G0414200 PROTEIN 959 1171 - -
Amo10g0034 1209 Gene3D - 118 286 IPR027417 -
Amo10g0034 1209 Gene3D Ribonuclease Inhibitor 1027 1203 IPR032675 -
Amo10g0034 1209 Gene3D - 292 374 IPR042197 -
Amo10g0034 1209 SUPERFAMILY L domain-like 451 883 - -
Amo10g0034 1209 Pfam NB-ARC domain 155 357 IPR002182 GO:0043531
Amo10g0034 1209 PANTHER OS05G0414200 PROTEIN 3 945 - -
Amo10g0034 1209 CDD AAA 131 272 - -
Amo10g0034 1209 Gene3D Ribonuclease Inhibitor 623 891 IPR032675 -
Amo10g0034 1209 PANTHER DISEASE RESISTANCE PROTEIN RP 959 1171 IPR044974 GO:0006952
Amo10g0034 1209 PANTHER DISEASE RESISTANCE PROTEIN RP 3 945 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0034 Amo-Chr10 419459 425535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo10g0034 156 806 WRKY Transcription Factor Family AT5G45050 22.674 1.50e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0034 - - ahf:112719656 1777.3