Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0008 ATGGTAGCCCCAAAATTTTCTACTAAGCCAAAAATATGCTACAGGCCCATTCGACCTTCTGACTTAGAGACTTTAGAGCATATCCATACGAAAGTGTTTCCCGTCAGGTATGAAGCTACTTTCTTCCACGATGTGGTAAACGGATGTGACATTGTGTCATGGGGAGTTGTAGACTCTAATCGACCAGATGGCCGGTGTGATGAGCTCATTGGATTTGTGACAGCACGGGTTGTTTTTGCTAAAGAAAGCGAGATAGTGGATCTGCTTGGATATGACTCGGCCAAATCAGATCAAACTGTAGTTTACATTCTGACGCTTGGAGTAGTGGATACTTATAGGAAACTTGGAATCGCATCTTCTCTGATTAAGGAGGTCATAAAATATGCTTCAAGCATTCCAACATGCCGAGCTGTTTATTTGCACGTAATTTCTTACAACAAACCGGCAATCTTTTTGTACAAGAAAATGTCTTTCAAGTGCATAAGGAGGCTGCAGGAATTTTATTTAATCAATGGCCTACATTATGATTCATACTTGTTCATGTACTATGTAATGGGGGACGATCTCCTTGCTCACCATTAG 582 0.4107 MVAPKFSTKPKICYRPIRPSDLETLEHIHTKVFPVRYEATFFHDVVNGCDIVSWGVVDSNRPDGRCDELIGFVTARVVFAKESEIVDLLGYDSAKSDQTVVYILTLGVVDTYRKLGIASSLIKEVIKYASSIPTCRAVYLHVISYNKPAIFLYKKMSFKCIRRLQEFYLINGLHYDSYLFMYYVMGDDLLAHH* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0008 193 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 182 IPR016181 -
Amo10g0008 193 Gene3D - 4 187 - -
Amo10g0008 193 PANTHER BNAC09G41050D PROTEIN 2 188 - -
Amo10g0008 193 CDD NAT_SF 77 141 - -
Amo10g0008 193 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 2 188 IPR045141 GO:0004596
Amo10g0008 193 Pfam Acetyltransferase (GNAT) family 31 158 IPR000182 GO:0016407
Amo10g0008 193 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 190 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0008 Amo-Chr10 171979 172560 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo10g0008 Acetyltransf_1 3.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0008 K22767 - gmx:100812509 322.783