Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0003 ATGATTTTCAAGACACTAGAAGAAGCTGGAAAGTTCTACAAACATTATTCCAAACTTGCTGGTTTTTCTACCAAAATAAGAAACACAACTCGGGACGGAGACAAGATTAAGAATCAACTAATTGTATGTTCCAGAGAGGGGATGCGAAAATCAAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGATTAAATTGTCCAGCCAGAATTTATGTGCAGATAATGAAGGATATTAGTCTTTGGACAATTTCCAAAGTTATTTTGAATCACTCACATCCTTGTTGTGCAGACCAGGCTGAGATGCTCAAACAACATAGGGAGCTTAGCATGTTCGTGCGTCGCACCATCGAAACCAACGAGGAAGCCGGAATCAGACCGAGCAAAACTTACCAATCATTTGTGGCAGCAGCTGGCAGCCACCGTGAACTAGCATGCCCTATTTTCGGTTCACCAGACCTTATAGTTTCTGTTTGGTTTGCAGAGCTGTACGAGAATCGCCATATATGGATTCTGGTTTACTTGGATCACCACTTTTGGGCCGGGATGAGAAGCACGCAAAGGAGTGAGAGTATGCATTCATTTTTCAACAAGTTCATCACACGGAATAGCTCCTTGAGACAATTCATGAAGCAATACGACAATTGCCTAGCAAGCAAAGAGCAAGCAGAGAGAGAATTCGATGCTGCAGATTTTCACACCGTGATACCGTGCACAACAAAATTAGCAATAGAGGCACAGTTCAGCGTGTATATACCCATGAGAAGTTCAGGAAAGTTCAAGCTCAATTCAGAGGTAAAGTGA 804 0.4229 MIFKTLEEAGKFYKHYSKLAGFSTKIRNTTRDGDKIKNQLIVCSREGMRKSKISPTLKTNPSAGLNCPARIYVQIMKDISLWTISKVILNHSHPCCADQAEMLKQHRELSMFVRRTIETNEEAGIRPSKTYQSFVAAAGSHRELACPIFGSPDLIVSVWFAELYENRHIWILVYLDHHFWAGMRSTQRSESMHSFFNKFITRNSSLRQFMKQYDNCLASKEQAEREFDAADFHTVIPCTTKLAIEAQFSVYIPMRSSGKFKLNSEVK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0003 267 Pfam FAR1 DNA-binding domain 11 95 IPR004330 -
Amo10g0003 267 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 155 249 IPR031052 GO:0006355
Amo10g0003 267 PANTHER OS06G0517100 PROTEIN 1 131 - -
Amo10g0003 267 Coils Coil 206 226 - -
Amo10g0003 267 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 131 IPR031052 GO:0006355
Amo10g0003 267 PANTHER OS06G0517100 PROTEIN 155 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0003 Amo-Chr10 126694 128288 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo10g0003 FAR1 2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0003 - - aip:107636756 266.544