Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2844 ATGGGGGCTGGTATTTCTTTGTCAACTTCAAACAAGTGTGATTATGATGATGGAAAGCCAGGTCTTGGGGACATACCAGAGAGCTGCATATCAAGGTTGCTGATGAATCTGGATCCACCAGAAATATGCCAACTGGCTAGAGTGAACCGCGCTTTTCACAGAGCTTCCTCAGCTGATTTTGTGTGGGAATCAAAGTTGCCACAAACCTACAAGTTCCTTGCCAAAAAAGTCTTTGCTCAACACAATATTATTGCTTCTATGACTAAGAAAGACATTTATACAAAACTATGTTTACCCAATCGCTTCGATGCTGGCACCAAGGAAGTTTGGTTGGATAAATGGAGCGGACAAATTTGTTTGTTCATGTCATCCAAGTCCTTCAACATAACAGGAATAGATGATAGAAGATATTGGAATTATATTCCAACTGAAGAATCCAGGTTCAAGAGCGTTGCCTATCTTCAACAAATGTGGTGGGTTGAGGTGGTGGGGGAGCTAGAGTTTGAATTCCCTGTGGGCAGRTACACCCTATTTTTCAGACTCCAATTGGGCATGGCCTCTAAAAGAAAGGGCCGCCGTGTGTGCAACGTGGACCAAGTCCATGGCTGGGACATCAAGCCCGTCCGATTTCAACTCTCCACATCACACGGCCAMCMTTCTCACTCAGAGTCTTATTTGACTYGCCCAGGGGAGTGGATCCACTACCGTGTTGGAGATTTTATTGTTGATAGGCCCAATGAGCCCACTAAACTGAAGTTCTCTTTGGCCCAAATTGATTGCACTCACACCAAAGGTGGCCTCTGCATAGATGGTGCCATCATCTGCCCAACCCAGTTTAGCCACAAAATTWTACTCTTCTAG 861 0.4472 MGAGISLSTSNKCDYDDGKPGLGDIPESCISRLLMNLDPPEICQLARVNRAFHRASSADFVWESKLPQTYKFLAKKVFAQHNIIASMTKKDIYTKLCLPNRFDAGTKEVWLDKWSGQICLFMSSKSFNITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGRYTLFFRLQLGMASKRKGRRVCNVDQVHGWDIKPVRFQLSTSHGXXSHSESYLTXPGEWIHYRVGDFIVDRPNEPTKLKFSLAQIDCTHTKGGLCIDGAIICPTQFSHKIXLF* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2844 286 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Amo09g2844 286 Gene3D - 16 97 - -
Amo09g2844 286 PANTHER F-BOX PROTEIN 1 285 - -
Amo09g2844 286 SUPERFAMILY F-box domain 17 79 IPR036047 GO:0005515
Amo09g2844 286 PANTHER F-BOX PROTEIN PP2-A15 1 285 - -
Amo09g2844 286 Pfam Phloem protein 2 118 276 IPR025886 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2844 Amo-Chr9 107622198 107625468 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2844 - - gmx:100795463 459.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4463 19 161586561 161592060 Amo09g2844 09 107622198 107625468 hybridization
Amo19g4503 19 162290013 162295578 Amo09g2844 09 107622198 107625468 hybridization
Amo09g2844 09 107622198 107625468 Amo19g4463 19 161586561 161592060 PCT
Amo19g4463 19 161586561 161592060 Amo09g2844 09 107622198 107625468 PCT