Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2837 ATGTCTGGAGGTCCATATTGGAAGGTACTAAAAGGAAGGAAAGATGGAAAGGTTTCAAAGGCATCTGATACCAGCAACTTACCTGCACCATTCTTCAATGTCAGCCAACTCATTCAAAGCTTTGCTAAGAGAGGTTTAGGAGTGAAAGACATGGTGACTTTATCTGGTGGCCACACCCTAGGCTTCTCACATTGTTCTTCCTTTGYAGCTCGCCTTCGCAATTTTAGTTCAGTGCATGACATTGATCCACGCATGAACACCGAGTTTGCAGTAGGCCTAAGAAAGCAGTGCCCAAAGCCAAACAACAATGGTGATGCAGGGCAGTTWTTGGACTCRACAGCTTCGGTTTTTGATAATGATTATTTCAGACAACTGTTGGCAGGAAAAGGTGTGTTCTCTTCCGACCAATCACTGGTTGATGATTCCAGGACTAGATGGATTGTTGAAGCATTTGCCAGAGACCAGAGTTTGTTCTTCAAAGAGTTTGCAACTTCGATGCTGAAACTTGGAAATGCAAGAGGTTCTGGAGATGGAGAAGTGMGACTTAAGTGCAGGTTCAAGAACTAA 567 0.4356 MSGGPYWKVLKGRKDGKVSKASDTSNLPAPFFNVSQLIQSFAKRGLGVKDMVTLSGGHTLGFSHCSSFXARLRNFSSVHDIDPRMNTEFAVGLRKQCPKPNNNGDAGQXLDSTASVFDNDYFRQLLAGKGVFSSDQSLVDDSRTRWIVEAFARDQSLFFKEFATSMLKLGNARGSGDGEVRLKCRFKN* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2837 188 ProSiteProfiles Plant heme peroxidase family profile. 1 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 Gene3D - 1 188 - -
Amo09g2837 188 SUPERFAMILY Heme-dependent peroxidases 2 188 IPR010255 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PANTHER PEROXIDASE 66 1 186 - -
Amo09g2837 188 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Plant peroxidase signature 164 177 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Plant peroxidase signature 49 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Plant peroxidase signature 108 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Plant peroxidase signature 124 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Haem peroxidase superfamily signature 110 125 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Haem peroxidase superfamily signature 50 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 Gene3D Peroxidase, domain 2 28 169 - -
Amo09g2837 188 PANTHER PEROXIDASE 25-RELATED 1 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Amo09g2837 188 ProSitePatterns Peroxidases proximal heme-ligand signature. 50 60 IPR019793 -
Amo09g2837 188 Pfam Peroxidase 2 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2837 Amo-Chr9 107490756 107492191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2837 1 188 Peroxidase AT5G51890 67.196 1.98e-91 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2837 K00430 - gmx:100799516 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4476 19 161807417 161808814 Amo09g2837 09 107490756 107492191 hybridization
Amo09g2837 09 107490756 107492191 Amo19g4476 19 161807417 161808814 PCT
Amo19g4476 19 161807417 161808814 Amo09g2837 09 107490756 107492191 PCT