Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2833 ATGACAAGAACAAGATCAGGAAATTATTCGAGTGATTTCTCCTCGGAAATGAGCTTCTCTCCGGGAACCAAGACACCAACATTGGTTGCAAGATTGATGGGGCTTGATCTTCTTCCTGAAAACAACTCTTCCTCTCCTAATTCCTCCTCTTCTTCAACCCTCTCCACTCCAATAATTARTAACAAACATGGAAGAAGCAACAACAATAACAATAATCCACCAGTTCATCATAACCCTAAAGCAAGGCACCAGCATCACCACATCCAAATAATGAGACACAGACACAGCACAGACAGCATAGGAACCATTCGTTCCTTGTCTGATACTCCAAGAAGATCAGATGTTGAGCATAGTAGACTCTCTTTGCAAATCAACAAGGAGAACATTGGGGTTGATGAGAACTACTTGGAARCCCCTCGCTTCTCATTTTCAAAGAGGAAATTTGATGAGAACAACAACAATAGTAGTAGCAGCAGAAGTCCAAGCCACTATGCAAGGCAAATTGTGAAGCAGGTTAAGGAAAGTGTAARCAGGAGAGTTGGGATAACTGACATAACCAACACTGTTAAGAACAGAGAGCAAGAATCTTCTGTGGTCCAACAAATCAGATTCAAGAAAGCTACAAAGACRAGTAGTAATGTGAATGTGAATGTGAATGTGATTGTGAATGAAGCTTGCAGCCCGGGGAAGCAGTCSCCAAGACTCAGCAGATTCGTTGACTCCAAACAWAATAACCCAAACAGCATCACAAAACCATCATCACCTCTTACCCCAAAAGATCAAAAGCCGTTATCATCGTCACCTACTACTACTCCACTTCCTATTGCTCACCAGAYTGAAACACAATTAAGCTCAAAAGATGATTTGCAGAGCAAAAAGTCATCATCAGCTCCAAAATGCAAGAGAAGCAGGACTACTGAGAAGTTGGGATCAGGGGTGAATAGGACTACTGCTCCACAGACATCATCAATAAGAAAGAAGCAACAAGAGTCATTTGTTKCCTGTACACTCTCRCCAACAAGACCCAARACCAAGAACAGATCAACTCATCCACTTTCAAGCAACCTTCTTCTCAATACAGCTCCAAATCTTCTCCCTGTCAAGACTCACCCTTCTCCTCTCCCAACTAAAATCCCCCAAAAACAGCCATGTGATACTCAAGAACAAAAACGCAGCAGCGCACAGTTATCAAGTTATGCCCGCCAGAAGTACAAAAAAGATGCAATTCAAACACCCGCCACCGCCACAACCGCCGGCACCGCCACCACCGCAGCCGACGATCAAGGACCAGAATTTGAGTACATCACAAGCATACTAAGCCGCACGGGGTTGCGCAAAGCTACGTTACCCCAAATCCAATACCAATGGTTCTCTCTTTCCCACCCATTAGACCCTTCACTCTTTCACAACCTCGAGCATCATTACCCATCATCCAATCCCGACAAAGGTTGCATCTTTACGCAGAGGGACCAACTGGGTCCTCGCTGTAACCGGAGACTACTATTCGACTTGGTCGATGAACTGCTGTCGGAGATTCTGGCAAGACGAAAACAGGAGCGTGGGTTGTTGGTGGAGACTGTGTGGAGGAAGGTTCGGAGTTTCCCAGGCGCGAAGTGTGAGGTTCTGGAGGATATTGATGGGTTGATAGAAATGGAGGAGATGGAGAGGAAGGTGAAGGAGGAAAGAGAAGAAGGGTTGGTGATGGAGATTGGAAGGAGCATAATGGAGACGTTGGTGCATGAAACTGTTACCGTCTTCATGCTTTGA 1767 0.4482 MTRTRSGNYSSDFSSEMSFSPGTKTPTLVARLMGLDLLPENNSSSPNSSSSSTLSTPIIXNKHGRSNNNNNNPPVHHNPKARHQHHHIQIMRHRHSTDSIGTIRSLSDTPRRSDVEHSRLSLQINKENIGVDENYLEXPRFSFSKRKFDENNNNSSSSRSPSHYARQIVKQVKESVXRRVGITDITNTVKNREQESSVVQQIRFKKATKTSSNVNVNVNVIVNEACSPGKQSPRLSRFVDSKXNNPNSITKPSSPLTPKDQKPLSSSPTTTPLPIAHQXETQLSSKDDLQSKKSSSAPKCKRSRTTEKLGSGVNRTTAPQTSSIRKKQQESFVXCTLSPTRPKTKNRSTHPLSSNLLLNTAPNLLPVKTHPSPLPTKIPQKQPCDTQEQKRSSAQLSSYARQKYKKDAIQTPATATTAGTATTAADDQGPEFEYITSILSRTGLRKATLPQIQYQWFSLSHPLDPSLFHNLEHHYPSSNPDKGCIFTQRDQLGPRCNRRLLFDLVDELLSEILARRKQERGLLVETVWRKVRSFPGAKCEVLEDIDGLIEMEEMERKVKEEREEGLVMEIGRSIMETLVHETVTVFML* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2833 588 MobiDBLite consensus disorder prediction 1 25 - -
Amo09g2833 588 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 2 586 - -
Amo09g2833 588 MobiDBLite consensus disorder prediction 1 111 - -
Amo09g2833 588 Pfam DUF761-associated sequence motif 14 44 IPR032795 -
Amo09g2833 588 MobiDBLite consensus disorder prediction 309 366 - -
Amo09g2833 588 MobiDBLite consensus disorder prediction 379 396 - -
Amo09g2833 588 PANTHER DUF4378 DOMAIN PROTEIN 2 586 - -
Amo09g2833 588 MobiDBLite consensus disorder prediction 237 291 - -
Amo09g2833 588 MobiDBLite consensus disorder prediction 38 77 - -
Amo09g2833 588 MobiDBLite consensus disorder prediction 226 396 - -
Amo09g2833 588 Pfam Domain of unknown function (DUF4378) 431 581 IPR025486 -
Amo09g2833 588 MobiDBLite consensus disorder prediction 78 92 - -
Amo09g2833 588 MobiDBLite consensus disorder prediction 292 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2833 Amo-Chr9 107460299 107462489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2833 2 587 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 32.025 3.88e-47 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2833 - - adu:107466876 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4479 19 161837106 161839661 Amo09g2833 09 107460299 107462489 hybridization
Amo09g2833 09 107460299 107462489 Amo19g4479 19 161837106 161839661 PCT
Amo19g4479 19 161837106 161839661 Amo09g2833 09 107460299 107462489 PCT