Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2812 ATGCCTATACGGTGGGCAAATCCGTTCTCAAATTCAAAAGAAACCAAGAAGAAAGCAAGTAAGGAAAGTTTTATTGGCACACTGCATCGGAAATTTAAAACACCATCTGAAGGTAGATTAGGCAGTAGATCTGGAGGTCCTGGTAGACGCTGCAATGACACAATTTCAGAGATGGGGGATCGTTCTCCAGCTGAATCAAGATCTCCTTCGCCTTCCAAAGTGGCAAGATGTCAAAGTTTCGCTGAAAGGCCTCATGCTCAGCCATTACCACTTCCTGGTCTTCACCCTTCAAGTATAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAAAAGAGCTCCAAGCCATCATTCCTTCCACTTCCAAGACCTGCATGTATGCGAGGAAGGACAAATCCTTCAGATTTGGATGGAGATATGGTTGCTTCAATCTCCAGTGATGGTTCTGCTGATAGTGATGACCAAACAGAGTCACGCAACCGAAGTCCTTTGGCAACTGACACCGATACTGGGACTAGAACTGCTGCCGAGAGTCCTTCCAGCATGATGCTCAAGGATCAACCATCTGTTGTCTCCCAACTAAATTCAAGAGAAGCCAAAAAACCAGTGAACATTCTAAGTAATCATATGTCTTCTACTTCACCAAAACAGAGGCCTTTAAGGAACCATGTTCCGAATCTGCAAGTTCCCCCTCATGGTGCCTTCTATAGTGCTCCAGACAGTTCCTTGTCAAGCCCATCGAGAAGCCCGTTGAGAGCGTTTGGCACAGATCAGGTGTTGAACTCTGCCTTCTCGGCTGGAAAGCCATACCCTGAGTTCAATTTAGCCGGTTCTGGCCACTGCTCTAGTCCAGGTTCCGGTCACAATTCTGGGCACAATTCAATGGGTGGGGACATGTCAGGACAGTTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTTCCTAGTCCCAGAATGACTAGTCCTGGTCCTAGCTCTAGAATTCAGAGTGGAGCCGTCACACCTATTCATCCTAGAGCTGGGGGAACACCCACTGAATCACAGACAAGCTGGGCTGATGATGGAAAACAACAGAGTCATCGTTTGCCACTTCCTCCTTTGACAATTACCAATTCCTCGCCTTTCTCTCATTCCAATTCTGCAGCAACTTCTCCATCCATGCCAAGAAGTCCAGCTAGAGCGGAAAATCCAGTGAGCCCTGGCTCACGTTGGAAAAAAGGAAAGCTGATTGGCAGAGGCACATTTGGACATGTCTACGTCGGCTTCAATAATGATAGTGGTGAAATGTGTGCAATGAAGGAGGTTACCCTGTTTTCAGATGATGCCAAGTCTTTAGAGAGCGCTAAACAATTAATGCAGGAAATTTCTTTATTAAGTCGGCTTCGGCATCCAAATATTGTGCAGTACTATGGTTCTGAAACGGTAGATGACAAGCTTTACATATACCTGGAGTATGTATCCGGAGGCTCCATATATAAACTTCTTCAAGAATATGGACAGTTTGGTGAACTAGCTATTCGTAATTATACTCAACAAATTTTGTCAGGGCTTGCTTATCTGCATGCTAAGAATACTGTCCACAGGGACATCAAGGGTGCAAATATACTTGTAGATCCAAACGGCCGGGTCAAGTTGGCAGATTTTGGCATGGCAAAACATATAAAAGGGCAATCATGTCCATTGTCAATCAAGGGAAGCCCTTATTGGATGGCTCCTGAGGTTATAAAGAACACTAGTGGATGCAACCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACCAAGCCCCCTTGGAGTCAATACGAAGGGGTTGCTGCCATGTTCAAGATAGGTAATAGCAAGGAACTCCCAAAAATCCCAGATCACCTCTCAAATGAAGGAAAAGATTTTGTAAGGAGATGTCTACAACGTGATCCACATGATCGACCTTCAGCCAGTGAATTGTTGGAGCATGCTTTTGTGAAGTGTGCTGCACCTTTGGAAAGACCTATTCTGGGTCCTGAAGCATCAGACCCTCATCCTGCAATTACACAGGGAACAAAAACTCTGATAGACTTGCTTGACATCCATATTCCAAGAAATATATCTTGCCCTGTCTCTCCCATTGGAAGTCCACTTTTGAGGTCAAGATCACCACAGCACATGAATGGAAGAATGTCACCTTCTCCAATATCTAGTCCACGGACTGCTTCTGGTGCATCGACGCCTCTCACAGGTGGCAACGGTGCCATTCCATTCAGCAACCAATTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGTAAGCATGCCCAAGTCCCCAAATGGTGTCTACATCAGTGGCTCTGCACATAATGACTCAAATGTTGACATTTTTCGTGGAATGCAAATGGGGTCTCACATTACCTCAGAACTAGTTCCCAGTGAAAATGATATTCTGGGTAAGCAGTTCACAAGGCCATCTCATCCTGAGCCATATGATTTTCAATCAGTCTTGGCGGATCGTGTTGGCCGGCAGCTGCTGCGGGACCACGTGAAGATTAACCCATCCCTTGATCTAAATCCCAACTCCACTTTGCTGAGCCGAGGAAATGGTTTGTAA 2619 0.4544 MPIRWANPFSNSKETKKKASKESFIGTLHRKFKTPSEGRLGSRSGGPGRRCNDTISEMGDRSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSIGRVDSEISISSKSRLEKSSKPSFLPLPRPACMRGRTNPSDLDGDMVASISSDGSADSDDQTESRNRSPLATDTDTGTRTAAESPSSMMLKDQPSVVSQLNSREAKKPVNILSNHMSSTSPKQRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFSAGKPYPEFNLAGSGHCSSPGSGHNSGHNSMGGDMSGQLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTSWADDGKQQSHRLPLPPLTITNSSPFSHSNSAATSPSMPRSPARAENPVSPGSRWKKGKLIGRGTFGHVYVGFNNDSGEMCAMKEVTLFSDDAKSLESAKQLMQEISLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIYKLLQEYGQFGELAIRNYTQQILSGLAYLHAKNTVHRDIKGANILVDPNGRVKLADFGMAKHIKGQSCPLSIKGSPYWMAPEVIKNTSGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPKIPDHLSNEGKDFVRRCLQRDPHDRPSASELLEHAFVKCAAPLERPILGPEASDPHPAITQGTKTLIDLLDIHIPRNISCPVSPIGSPLLRSRSPQHMNGRMSPSPISSPRTASGASTPLTGGNGAIPFSNQLKQSVYFQEGLVSMPKSPNGVYISGSAHNDSNVDIFRGMQMGSHITSELVPSENDILGKQFTRPSHPEPYDFQSVLADRVGRQLLRDHVKINPSLDLNPNSTLLSRGNGL* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2812 872 MobiDBLite consensus disorder prediction 14 37 - -
Amo09g2812 872 ProSiteProfiles Protein kinase domain profile. 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2812 872 MobiDBLite consensus disorder prediction 284 412 - -
Amo09g2812 872 MobiDBLite consensus disorder prediction 348 363 - -
Amo09g2812 872 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Amo09g2812 872 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 10 786 - -
Amo09g2812 872 MobiDBLite consensus disorder prediction 102 117 - -
Amo09g2812 872 SUPERFAMILY Protein kinase-like (PK-like) 409 741 IPR011009 -
Amo09g2812 872 MobiDBLite consensus disorder prediction 59 75 - -
Amo09g2812 872 MobiDBLite consensus disorder prediction 715 756 - -
Amo09g2812 872 Pfam Protein kinase domain 412 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2812 872 MobiDBLite consensus disorder prediction 1 254 - -
Amo09g2812 872 CDD STKc_MEKK1_plant 410 667 - -
Amo09g2812 872 SMART serkin_6 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo09g2812 872 MobiDBLite consensus disorder prediction 719 756 - -
Amo09g2812 872 Gene3D Transferase(Phosphotransferase) domain 1 409 682 - -
Amo09g2812 872 MobiDBLite consensus disorder prediction 370 397 - -
Amo09g2812 872 MobiDBLite consensus disorder prediction 284 313 - -
Amo09g2812 872 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 10 786 - -
Amo09g2812 872 MobiDBLite consensus disorder prediction 165 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2812 Amo-Chr9 107186069 107191040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2812 9 861 MAP Kinase Kinase Kinase AT1G63700 58.061 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo09g2812 Pkinase 3.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2812 K20717 - gmx:100792783 1350.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo09g2812 09 107186069 107191040 Amo09g2812 09 107186069 107191040 PCT