Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2798 ATGGAAGACCAGCCACCAACAAAGCCATCACCAACAACGAAGACCTACAAGCTCACTGCCACTTCAATCTCCTACACTAAATCCACCACCACCACCATCACCACCACCACCTTTGCTGTACCACTCTTACTCTTCAAACATTGCACAACAACCCCACCAACCTACATCCTCAAAGACGTCTCCTTAACTGCATACCCTTCTGAAATCCTTGCCATTGTTGGCCCAAGTGGTGCAGGAAAATCCACCCTCTTAGACATTCTCTCTGCTAGAACACTTCCATCACATGGAACTCTTGAACTCAACAATTCCCCTCTTATTCCTTCCACATTCAGAAAACTCTCAGCATATGTTCCACAACATGATGCATGCCTCCCTTTGCTCACAGTGTCTGAGACTTTTGCATTTTCAGCACACCTCCTCAAGCCTAAAACCTCTGACATTGCAGCCATAGTTTCTTCTCTTCTCAGTGAACTGAGGTTAACTCATTTGGCACACACAAGGCTCTCTCATGGTCTATCAGGTGGAGAACATAGAAGAATCTCCATAGGCCTTAGTCTTCTCCATGATCCTGCAGTGTTGCTCCTTGATGAACCAACTTCAGGCCTTGACAGCACCTCTGCATTCAAGGTCATGCAGATTCTCAAATCCATTTGCGTTTCACGTCACAGGACAATTGTTCTCTCCATTCACCAACCAAGCTTCAAGATCCTCTCTTGCATTGATAGGATCTTGTTGCTGTCCAAGGGTACTGTGGTCCACCACGGAAGCCTTGCATCACTCCAAGCATTCTTACACTCAAATGGCTTTACCGTGCCTCATCAACTCAATGCATTGGAATATGCAATGGAAATATTAAGTCAATTGAACGAGCTTAAGCCTATTACTCCACCAAGCATTCCTGAATCACCTGAAAGTTCATCAGCTGCAAGTTCCATATCTGATAACAATGGACATAGATCCAAAGAGATAATAAGGTACAAGAGCTCCAGAATCCATGAAATATGCACTCTATATGGCAGGTTTTGGAAGATAATATACAGAACAAGGCAACTCCTTTTAACAAACACCTTAGAGGCACTTCTTGTAGGGCTTGTTTTGGGAACAATTTACATCAACATAGGGTTTGATAAGGAAGGAATTGAGAAAAGGTTTGAAACATCAAGCGGGGTTTATAGGCTCTCATCATATCTCATTGCAAACACACTTGTTTTCTTGCCATACTTGCTTGTAGTTGCAATCATATACTCCATCCCAGTCTACTTCTTAGTTGGTTTATGTGCTTCTTGGATTTCTTTTGCTTATTTTGTTCTGGTCATTTGGGTAATTGTTCTCATGGCAAACTCCTTTGTGCTCTTCTTGAGTTCCCTGGCACCTAACTACATTGCTGGCACATCACTATTAACAGTGCTTCTTGCAGCATTTTTTCTGTTCTCTGGGTACTTCATCTCAAAGGAGAGTTTACCAAAGTACTGGCTTTTCATGCATTTTTTGTCCATGTACAAGTATGCACTTGATGCATTACTCATCAACGAGTACTCTTGTTTGGCCACAAGGTGTTTGATATGGTACCAAGAGAATCAAGTTTGTATGGTAACTGGGGGTGATGTGTTGCAGAAGAGGGGGCTCCAAGAAAGTCAAAAATGGACCAATGTTTACTTCTTGATTGGGTTCTTTGTGTTGTACCGTGTGCTTTGCTTGTTGGTTTTGATTAGAAGAGTTTCAAGGTCCAAAACTTGA 1737 0.4254 MEDQPPTKPSPTTKTYKLTATSISYTKSTTTTITTTTFAVPLLLFKHCTTTPPTYILKDVSLTAYPSEILAIVGPSGAGKSTLLDILSARTLPSHGTLELNNSPLIPSTFRKLSAYVPQHDACLPLLTVSETFAFSAHLLKPKTSDIAAIVSSLLSELRLTHLAHTRLSHGLSGGEHRRISIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKSICVSRHRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLASLQAFLHSNGFTVPHQLNALEYAMEILSQLNELKPITPPSIPESPESSSAASSISDNNGHRSKEIIRYKSSRIHEICTLYGRFWKIIYRTRQLLLTNTLEALLVGLVLGTIYINIGFDKEGIEKRFETSSGVYRLSSYLIANTLVFLPYLLVVAIIYSIPVYFLVGLCASWISFAYFVLVIWVIVLMANSFVLFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKESLPKYWLFMHFLSMYKYALDALLINEYSCLATRCLIWYQENQVCMVTGGDVLQKRGLQESQKWTNVYFLIGFFVLYRVLCLLVLIRRVSRSKT* 579
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2798 578 Pfam ABC-2 type transporter 230 290 IPR043926 GO:0140359
Amo09g2798 578 MobiDBLite consensus disorder prediction 296 316 - -
Amo09g2798 578 Pfam ABC-2 type transporter 385 512 IPR013525 GO:0016020|GO:0140359
Amo09g2798 578 SMART AAA_5 66 250 IPR003593 -
Amo09g2798 578 MobiDBLite consensus disorder prediction 301 316 - -
Amo09g2798 578 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 264 IPR027417 -
Amo09g2798 578 Pfam ABC transporter 57 200 IPR003439 GO:0005524
Amo09g2798 578 Gene3D - 44 291 IPR027417 -
Amo09g2798 578 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 38 273 IPR003439 GO:0005524
Amo09g2798 578 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 384 - -
Amo09g2798 578 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 385 573 - -
Amo09g2798 578 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 5 384 - -
Amo09g2798 578 PANTHER ABC TRANSPORTER G FAMILY MEMBER 8 385 573 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo09g2798 Amo-Chr9 107086294 107088120 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2798 50 256 Calmodulin-binding Proteins AT2G36910 31.050 1.99e-17 84.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2798 K05681 - gmx:100790712 838.565