Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo09g2741 | ATGACTGTGATTGGGTTTGCGGTGAGCACCATGTTCATTGTGTTCGTGTGCACGAGGCTTGTCTGTGCTCGAATCCACTTGAATGCTTCAAGGAGATCCTTTCCCATTGCTTCCAGATCCAATCTTAGCATGATGGAACGGGGTTGGCATGGTCTTGAACGCACAGCTGTAGCTAAATTTCCAACAAAGAAGTTCAGTGACAAGTTCTTTTCGGCTGAAGAAAATTCTCAGTGTACAGTCTGCCTCTCGGAGTACCAAGGTGAAGACATTCTGCGTATCCTCCCCTACTGTGGACACTCATTCCATGTGACCTGCATAGACTTATGGCTGCAGCAGAATTCCACTTGTCCAGTTTGTCGAATATCATTGCGGGAATTTACTGAGAGAAAGCGGTTAATGCAACCCTTATTCAGCTCTGCTTTACGACCTCATCGCAGCGCAGAATCCATTGAGAACCCCCATTATCTCTGTATGATGGGTGATAATGGGTTACCATTGAGAACCCCAGACAACCATGGGGCTAATGTGATGCAAGAGGACAGTTTTCCATCCGAGGGTGGTGGAGCAGATGCTACAGATAGCATCACCTGTCTTATTCCGGACGATCTTGTTAAAGATGAAGAGAAGAGGCATATAGAGAGCCCGTCAAACTTCTAG | 657 | 0.4673 | MTVIGFAVSTMFIVFVCTRLVCARIHLNASRRSFPIASRSNLSMMERGWHGLERTAVAKFPTKKFSDKFFSAEENSQCTVCLSEYQGEDILRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFTERKRLMQPLFSSALRPHRSAESIENPHYLCMMGDNGLPLRTPDNHGANVMQEDSFPSEGGGADATDSITCLIPDDLVKDEEKRHIESPSNF* | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo09g2741 | 218 | PANTHER | OS11G0150450 PROTEIN | 1 | 217 | - | - | |
Amo09g2741 | 218 | SUPERFAMILY | RING/U-box | 71 | 126 | - | - | |
Amo09g2741 | 218 | PANTHER | OS11G0150450 PROTEIN | 1 | 217 | - | - | |
Amo09g2741 | 218 | SMART | ring_2 | 78 | 119 | IPR001841 | - | |
Amo09g2741 | 218 | ProSiteProfiles | Zinc finger RING-type profile. | 78 | 120 | IPR001841 | - | |
Amo09g2741 | 218 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 77 | 120 | - | - | |
Amo09g2741 | 218 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 125 | IPR013083 | - | |
Amo09g2741 | 218 | Pfam | Ring finger domain | 77 | 120 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo09g2741 | Amo-Chr9 | 106064401 | 106066847 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo09g2741 | 4 | 123 | C3H Transcription Factor Family | AT4G10150 | 34.677 | 5.13e-19 | 80.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo09g2741 | - | - | gmx:100786109 | 373.629 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo19g2997 | 19 | 137069112 | 137072010 | Amo09g2741 | 09 | 106064401 | 106066847 | hybridization |