Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2734 ATGGCTGACCCTTACGGCCTCCCAGAGGATCTCCGGCGACTCATGTCCAACAGACCTCACTTCACCACTGCCACCGCCGCCGCTCCTTTCTTTCCTCTGCCGGAGAACCCACTCTCTCTCCACCACCACCACCACCTCCTCAATGCTCCTCCTCCACCACCGCCTCTCAACACCACCTACGACCCAATCATCATCAACAACGTCGTCGGCGACCTTTTCTTCCCTCGTTCTAATAACAACACCACCAGCGCCGCCTTCACCGCTCATCATCATCACTTCCCTCTCCATCACCACCACCACAACTCCACCAACAATTCCCCGTCTTCTTCTTCTCTCAACCCCACACCCCCGCCACCTCCTCCTCCTCCTACTACTTCTGTCTCAGATCATCATCATCATCATGCATTCATGGCCGCCATGGACACTGCTTCTGCTGCTGCTGCTGCTGCATCCATGGAAAAAGGATGGCTGGCCTTCGACACCGGCACCAACCGCTGGCCTCGGCAGGAGACTCTCTCCCTTCTTGAGATCAGATCTCGTCTTGATTCCAAGTTCAGAGAAAATAATCAAAAAGCTCCCTTGTGGAATGAGATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGGAGTGGGAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAGGGAAAAGCTAGTAGACAAGATGGGAAACACTACAGATTCTTCAGGCAACTTGAAGCTATATGTGGTGGCGGTGGCGGTGGCGGCGGCAGCGGCGGAAGTGGTGGAGATTCATCAAACACTACTCATAATAATAATCTTCATGCCTTAGCTTCAAACACTGCTTCAGCTTCTGTTGCTGGTGCTAATGTTCAAACCCCAAGAAGCTTCAATGGTGATCATCATAACAATAATAGCTTGATCAAGTGTTCAGAGAGCTTGAGTTTTTCGAACTCGTGTGAACTGGAGACATCGTCATCTGAGAACAATGATGAGGATCTTTCAGCCATTGCATACATGATGAAGCACTCCACATCTTCAAGGGACAACAATAATAACAAGCAGAAAGGGGTGCAATTGGATGATGATCATCATGGGGGAAGGGTGAGAAGAAGAAGAAGCTTGAGGGCAAAAGTGGAAGAGATAGTTGGTTCCCACATGAGGAAGATCATCGAGACACAAGATGCATGGATGGAGAGAATGGTGAGTGTTGTTGAGCAAAGGGAGAAGGAGATGGCATCCATGGAGGAAGAGAGGAAGAAGAAAGAGTCAATGAGGTTTGACCAAGAGGTAACGGAGCTTTGGGCAAAAGAGAGAGCTTGGGTTGAAGCAAGGGATGCTGCATTGATAGAAGTTGTAAGAAAACACATTGGAAATGGAAACAATAATAGCAATAATAATAAAGAGTTTGAGATTATTGAAGCATTGGCACCTCAAAGCAATAACAAGAACAACAAGGGCCAAACTGCAAATAATAACAACAATAATGGTGGTGGTGGGAGGTGGAGTGAAATGGAGATATCAAACTTGATACAGTTGAGGACAGGGTTTGAAGAGAGAATGAGGGAGAATAATAATAATAATGGTGGAGGAGGGTATTATTTTGAGAGTAATAATAATAATAATAATGGGGTAAGTAGTGTTTGGGAAGAGATCTCAGGAAAATTGGGATGTTTGGGATTTGAGAGAAGTTCAGAAGAGTGTAAGCAGATTTGGGATGAGATCAGCATCTCACTTGGGAGGACAAATACTTCTGCTGCTGCTGCTGCTGTTGCCAAAACCAATAGGCCTTGGTGTTTGGAACTCAAGCTCACTGATGATGATGATGATGATGATGATGATGAACATCATCATGATCATGATGATCATCACATTTGA 1887 0.4584 MADPYGLPEDLRRLMSNRPHFTTATAAAPFFPLPENPLSLHHHHHLLNAPPPPPPLNTTYDPIIINNVVGDLFFPRSNNNTTSAAFTAHHHHFPLHHHHHNSTNNSPSSSSLNPTPPPPPPPPTTSVSDHHHHHAFMAAMDTASAAAAAASMEKGWLAFDTGTNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGGGGGGGGSGGSGGDSSNTTHNNNLHALASNTASASVAGANVQTPRSFNGDHHNNNSLIKCSESLSFSNSCELETSSSENNDEDLSAIAYMMKHSTSSRDNNNNKQKGVQLDDDHHGGRVRRRRSLRAKVEEIVGSHMRKIIETQDAWMERMVSVVEQREKEMASMEEERKKKESMRFDQEVTELWAKERAWVEARDAALIEVVRKHIGNGNNNSNNNKEFEIIEALAPQSNNKNNKGQTANNNNNNGGGGRWSEMEISNLIQLRTGFEERMRENNNNNGGGGYYFESNNNNNNGVSSVWEEISGKLGCLGFERSSEECKQIWDEISISLGRTNTSAAAAAVAKTNRPWCLELKLTDDDDDDDDDEHHHDHDDHHI* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2734 628 MobiDBLite consensus disorder prediction 95 130 - -
Amo09g2734 628 ProSiteProfiles Myb-like domain profile. 164 223 IPR001005 -
Amo09g2734 628 MobiDBLite consensus disorder prediction 256 276 - -
Amo09g2734 628 MobiDBLite consensus disorder prediction 483 505 - -
Amo09g2734 628 Coils Coil 401 428 - -
Amo09g2734 628 SMART sant 162 225 IPR001005 -
Amo09g2734 628 SMART sant 501 581 IPR001005 -
Amo09g2734 628 CDD GT1 164 230 - -
Amo09g2734 628 Gene3D - 505 581 - -
Amo09g2734 628 Gene3D - 166 228 - -
Amo09g2734 628 PANTHER - 72 587 - -
Amo09g2734 628 MobiDBLite consensus disorder prediction 483 506 - -
Amo09g2734 628 MobiDBLite consensus disorder prediction 358 376 - -
Amo09g2734 628 MobiDBLite consensus disorder prediction 348 376 - -
Amo09g2734 628 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 72 587 - -
Amo09g2734 628 MobiDBLite consensus disorder prediction 111 126 - -
Amo09g2734 628 Pfam Myb/SANT-like DNA-binding domain 164 251 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2734 Amo-Chr9 105867366 105870235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2734 165 579 Trihelix Transcription Factor Family AT5G03680 40.411 3.96e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Amo09g2734 Myb_DNA-bind_4 5.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2734 - - ahf:112711553 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2993 19 136949138 136952051 Amo09g2734 09 105867366 105870235 hybridization