Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2703 ATGGAATTTTTAGGGTTACTTGTTGCCCTATTGGCATCATTTTGCTTCCTGTTGATGTTGATACTAACATATGCATGGTGGGTTTCCCCATTTCTAACACATAACAAGCTTAAGAGATGTGGATTTGGAGGGCCAAACCCAGGTTTCCCACTTGGAAACCTCAAAGAGATGAACAATAAAAAGAATATTAAATCTTCCTCATCATCATCAACCCATGATATACACTCACAAGTTTTTCCCTACTTCTCTTGCTGGCAGAAATCTTATGGTAAGGTATTTGTTTATTGGCTAGGGACGGAGCCATTCTTGTACATTGCGGACGCAGAGTTGTTGAAGAGAATTTCCACGGAGGTCATGGCCAAGAGATGGGGGAAGCCAAGTGTGTTTAGAAATGACAGAGACCCCATGTTTGGGAGTGGCTTGGTCATGGTTGAAGGCAACGATTGGGTTCGTCATCGCCACATTGTTGCACCCGCATTCAATCCCATTAATCTCAAGGCGATGGCAAGCGTGATGAGTGAGTCGACAAATGAAATGATATCTCGATGGAGCAGCCAAATTAAGATCGGAAAACACGAAATCAACGTGGAGAGTGAGGTCATAACCCTCGCCGGAGAGATCATCGCCCGAACTATCTTCGGCTTGAAAGACGAGAGCGCTAGAGGCATTTTCAACAGGCTCAGCGCCCTTCAAATGACTCTCTTCAACACCAATCGCTACGTCGGGGTTCCATTCGGCAAGTACTTCAAGGTCAAGAAAACCCTAAAGGCCAAGAAATTAGGCGAAGAAATCGACCAGCTCTTGTTGTCTATCATTGAAGCTCGCAAGGCCTCGCCCAAGCCCAAGGGTTCTCAGAACGATTTGCTGTGTTTGCTGCTCCAAGAAAATAAGCTCACGACGAGGGAGCTTGTTGATGAATGCAAGACCTTCTTTTTCGGCGGCCATGAAACCACTGCGCTTTCTCTCACCTGGACTTTGCTGCTGCTCGCTATGCATCAAGATTGGCAGAACCAATTGAGACATGAGATTCAACAACGTCTTGCTCAACACAATCACGTTATTGATCTCGCCATGCTCTCTAGCTTAACCAAGATGAAGTGGGTGATGAATGAAGCTCTAAGGCTGTACCCTCCTTCACCAAATGTGCAAAGGCAAGCAAGAGACGACATTCAAATTGATGGTTTAACAGTGCCTAAAGGAACCAACATGTGGATTGATGTGGTGGCCATGCACCATGACCCGGAGCTATGGGGACACGATGCTAATGAGTTCAAGCCAGAGAGGTTCATGGAGGATGTGAACGGTGGATGCAAACACAAGATGGGTTACTTGCCATTTGGATTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGGCATTCATGGAGTACAAGATTGTGTTAACTCTACTTCTCTCTAAGTTTAGTTTCAACATTTCTCCAACTTACCGTCACTCACCAACTATCATGCTCTCTCTAAGGCCTACCCATGGAGTCCCACTCATAGTTCAGCCCCTTTAG 1518 0.4585 MEFLGLLVALLASFCFLLMLILTYAWWVSPFLTHNKLKRCGFGGPNPGFPLGNLKEMNNKKNIKSSSSSSTHDIHSQVFPYFSCWQKSYGKVFVYWLGTEPFLYIADAELLKRISTEVMAKRWGKPSVFRNDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMASVMSESTNEMISRWSSQIKIGKHEINVESEVITLAGEIIARTIFGLKDESARGIFNRLSALQMTLFNTNRYVGVPFGKYFKVKKTLKAKKLGEEIDQLLLSIIEARKASPKPKGSQNDLLCLLLQENKLTTRELVDECKTFFFGGHETTALSLTWTLLLLAMHQDWQNQLRHEIQQRLAQHNHVIDLAMLSSLTKMKWVMNEALRLYPPSPNVQRQARDDIQIDGLTVPKGTNMWIDVVAMHHDPELWGHDANEFKPERFMEDVNGGCKHKMGYLPFGFGGRMCVGRNLAFMEYKIVLTLLLSKFSFNISPTYRHSPTIMLSLRPTHGVPLIVQPL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2703 505 Gene3D Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 4 500 - -
Amo09g2703 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Amo09g2703 505 Pfam Cytochrome P450 76 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 4 500 - -
Amo09g2703 505 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo09g2703 505 SUPERFAMILY Cytochrome P450 74 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2703 Amo-Chr9 105142278 105145033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2703 17 505 Cytochrome P450 AT5G52400 57.515 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2703 - - gmx:100802882 744.577