Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2651 ATGACAGATGTTCAGCCACTACAGCAGAAGCCTGAGTCTGCCGATTCTCATGCTGAGTTCGAGCGTGGACTGGAGGACTTTATGCGTGGGCAGTTGGATGATTGTATGTCATTTGCCTCCTGTAGTTCCTCCCAGGCTCAGGGGGATGAGGAAGATGAGGGTGATCAGCTAGCTCGGAGGAGGCGTAGGTCTGATCTCGAAGGGGATGATTTGGCGGAGTCCTCGGCTGCACAGAGGCGCCACTCGCGAATTTTGAGTAGGTGGGCTGCTCGGCAGGCGCAGGAGATGATAACTACTATTGAGAGGAGGAATCGTGAGTCTGAGTTGATGGCGCTGGCTGGGTTGCACACGGTGTCTATGTTGGACTCCTCTTTCTTGAGGGGATCACAGTCCCCAACTTCTGGACAGGAGGGTGCCGTGGAGAGACCGAGCACTCAGGCATCTGCTATTCTGCAGATGTGGCGCGAATTGGAGGATGAGCATTTGTTGAACAGGGCTCGTGACAGGATGAGGGAAAGGTTGAGGCAACAGAGGGGTTCTGAGTCTAATACCAATGGGTCCAGTACCATGTCTGATAGTCGAGGCAGTGAGAATCAAGGCAGTTTGGGGGATGCGAGTGAAAGCGAAAATGATTTTGGTACTTGGTCGCATGATCGGATTGAATCGCGGAATGCACGTGGGGACCATCTTGTGTCTAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTCGAGAGGGAGAGAGTTAGACAGATTGTTCGAGGATGGATGGAAAGCGGTATTGGTGATCATTCATCGAATGTGAATCAGAGAAACAATAATGGTAGAGCAGAATGGCTTGGAGAAACAGAGCGTGAGAGGGTAAGAATTGTCAGGGAATGGGTGCAAATGACTAGCCAACAGAGAGGCTCACGTGGGAGCCGGAGGGATGCTCAAGTCGATCGAGCACGCGATGTGGTTGCTGATCATGATGAAGGCCAGCCAGAGCATGTTCGGCGGGACATGTTGAGGCTGCGTGGAAGACAAGCTCTAGTTGATTTGCTTGTGAGGATAGAGAGGGAAAGGCAAAGAGAGCTGCAGGGATTGTTGGAGCACCGAGCTGTATCTGATTTTGCTCACCGCAACCGCATTCAGTCTTTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGACCTCCGTCTACGGCTGCAAGTGAATTAGTGCAGTTGAGACAACGACATACAGTCTCTGGTATAAGGGAGGGGTTTCGTTCAAGATTAGAGAATATTGTTCGTAGTCAAGCAAGTACCAATTCTGATACTGCATCAAATAGTAACATTAGTGAAAGTGATGGGAGCCAAGGAAACAACCTGTTGGATGCCCAACAAGAAAATTACGAACAAGAGCAGATTAGGAACTTGGAATCTGATGTCCGTCAGTTGCCTAGTCAAACAGGAACTGTGGAGGGTAGCACGAATGAGAGTATTAGTTGGCAAGGTGGTGGTAATCAAGGAGGAAATCGGCAGGAACAGATTACTGAAGATGCGGAAGGAAACTGGCAGCAGAGAACCTATGATTGGCCACAAGAAACTCCCAGAAATTTAGCTGGGGAAGACACACATCCACAAGAAGCACAGAGAGTTTGGCATGAGGATAGTACAAGGGAAACTGTTGGTAATTGGTCTGAAGGACCTTCTGTAGCTCCAAGGAATCGCCGTGGTGTTCCTATTAGAAGATTCAATAGATTTCATCCACCCGATGATGATAATGTGTACAGTATGGAGCTTAGAGAGCTGCTAAGCAGGAGAAGTGTTTCTAATCTTCTTCGCAGTGGCTTCCGTGAAAGTCTTGACCAATTAATTCAGTCATATGTGGAAAGGCAAGGTCGTGCACCAGTTGACTGGGATTTGCATAGGAACTTGCCCATACCAACTCCTGCCTCAACCGAGCAGGACACTGATCAGCAAGGGGATGAACGCAATGAGGGTCGGCATGAAGGTATCAACAGACCTACACTGGTGATGCCATCACCTCCAGTACCTCCACCACAACCACTGTGGCACCAGGATCTCCATCAAACTGGATGGTCTCGCCATAGCATGCATCGTTCTGAAATCGAATGGGAGATAATGAATGATCTAAGATCAGATATGGCAAGACTTCAGCAAGGCATGAATCACATGCAGAGGATGTTGGAAGCGTGCATGGATATGCAGCTCGAGTTGCAGCGCTCTGTCAGACAGGAAGTTTCTGCAGCTCTGAACCGCTCAGCTGGTGAAAATGGCATGGTTGCTGAGACATCTGATGATGGGTCCAAGTGGGGGCATGTGAAAAAGGGAACTTGCTGCGTTTGTTGCGATAACCATATCGATTCACTTCTGTATAGATGCGGGCACATGTGCACTTGCTCAAAATGTGCCAATGAGTTAGTTCGCGGCGGAGGTAAGTGTCCTTTATGCCGAGCACCGATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 2496 0.4924 MTDVQPLQQKPESADSHAEFERGLEDFMRGQLDDCMSFASCSSSQAQGDEEDEGDQLARRRRRSDLEGDDLAESSAAQRRHSRILSRWAARQAQEMITTIERRNRESELMALAGLHTVSMLDSSFLRGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARDRMRERLRQQRGSESNTNGSSTMSDSRGSENQGSLGDASESENDFGTWSHDRIESRNARGDHLVSSREQSPDLGEVERERVRQIVRGWMESGIGDHSSNVNQRNNNGRAEWLGETERERVRIVREWVQMTSQQRGSRGSRRDAQVDRARDVVADHDEGQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSTAASELVQLRQRHTVSGIREGFRSRLENIVRSQASTNSDTASNSNISESDGSQGNNLLDAQQENYEQEQIRNLESDVRQLPSQTGTVEGSTNESISWQGGGNQGGNRQEQITEDAEGNWQQRTYDWPQETPRNLAGEDTHPQEAQRVWHEDSTRETVGNWSEGPSVAPRNRRGVPIRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPVDWDLHRNLPIPTPASTEQDTDQQGDERNEGRHEGINRPTLVMPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMNDLRSDMARLQQGMNHMQRMLEACMDMQLELQRSVRQEVSAALNRSAGENGMVAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2651 831 MobiDBLite consensus disorder prediction 633 677 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 476 508 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 211 245 - -
Amo09g2651 831 SUPERFAMILY RING/U-box 778 824 - -
Amo09g2651 831 Coils Coil 708 728 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 527 569 - -
Amo09g2651 831 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 831 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 179 210 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 1 24 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 650 664 - -
Amo09g2651 831 Pfam Zinc finger, C3HC4 type (RING finger) 776 823 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 431 454 - -
Amo09g2651 831 CDD mRING-HC-C3HC5_NEU1 778 818 - -
Amo09g2651 831 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 1 831 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 173 245 - -
Amo09g2651 831 ProSiteProfiles Zinc finger RING-type profile. 779 818 IPR001841 -
Amo09g2651 831 MobiDBLite consensus disorder prediction 540 554 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 52 77 - -
Amo09g2651 831 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 760 829 IPR013083 -
Amo09g2651 831 MobiDBLite consensus disorder prediction 39 83 - -
Amo09g2651 831 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2651 Amo-Chr9 104317073 104322742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2651 779 825 C3H Transcription Factor Family AT3G06140 42.553 1.45e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2651 - - gmx:100805607 1383.62