Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2600 ATGGCGGCAGAACTGTTGGGAGGAGCTGCCATTGGAGCTGTCTTCGGAGAATTGCTGAAGGCGGTTCTTGAAGTTAAGGACAAGGCCAGCAATTTCAAGAATACCTTGGCGTACCTCAGAACGATTCTGGTGAAGATAGATCCTTTGATCAAGGAAATGGAGCAACAGAACGATGAATTAGGGCGGCCGAAGGAGGAGCTGGATTCGCTGATTGAAGAGATGGAAGAGGGGACAAAGCTTGTTTACAGGTGTTCCAAGATCCACAGGTTGAATTTCCTTGCCAGGATACAGTACCAAGATGAACTTGCCAAATTGGTGGTGTCTCTAGAACGTTTCTTTAGGTTCGATGTGCCGGCTCAGACTTCAAGAGATACCAAAGAGACCTTGCTCAAAGTCACAAGGATACTTAGTGCTGTTAGGAAGCTCCCCTTAGCTAGAACTGAAAGCGCAACCGGTTCGGCTTCTGACTTGGATTCTATGACTCTGGAATCATATGTGTGTGACACTCTACCACTGCAGCTGAATGATGAAAAGGAGAGGGAAGCTGATTCTACCGAGGAAGCCGCTGAATTAGAGCGCCTTGCTAAGCCGGTGTTGGAAGATATTGCCAGCCTTGTGCAGAAGGGTAGCCAAGCAGAGGCAGAAATACATAAAGGGCGTCAAGACTTGCAAAACAAGCATGAAGCAAGTGGTAGACTGAGAAGCAGCATTGAGTTTTTTGGCAGTAGAATGGGATTTACAGTTAGTGATTCTATTTTATTCCATGAAAATAATTTGATTGCTGAAGATATCTCTAAACTAGAAGATGCATTTAAGCAGTTATTGTCATTTTTCAGCAAGCCTGTGGAACCTAAGCACCTCTTTGATTGCCTTACAAGCTCTATGCGACCCTCGTCAGGATCTCCCGGCCATGAGGGTGATCCTAGTGGAAAGAAACCTTCCTCTTCTCATCATTCTGAGTCCCACGAAAATAACAACAGTGCTGATCCTGTTTTATGTACTCTTCTCAATCTTATACCATCAAGAATTGTGTCACCTCTACATTACTTAGCTCAGCAACTGGTTGAAGCTGGTCAACAACAACAGCTACTCAGAATCTACAGAGATGCCCGTTCTAATTGGTTGGAAGAAAGCATCCAAATATTTGGGGTTGAGAAACTCAACAATGACGATGCTCAAAAGTTGCAGTTGGAGATATTAGAAGCCAAAATTGGAAGCTGGCATATAATGCCTATAGCCGTCAAGCTGTTTGCTGGAGAGCGGAATGTTTGTAATCTGATATTTGAAGGCTTTGATTCACTCGCTGAACAGTGTTTCTCCGAGGTGACTACAAACAATATCTCCATGCTACTTAGTATTGGTGAAGCAAATGCCAAAATCATTAAATCCCCGCAAAACTTCCATTTACTTTTAGACATGTGTGAAACAATGTTACAGCTTCATTTAGAGATTGAAACACTTTTTAGAGGCAAAGCTTGCACTGAAATAAGAGAAGCAGTATTTCGTTTTACAAAACAACTTGCACAAATGGCCAACGAGGTCTTTGGAGATCTCGAAGAAGTAGTTGAAAAGGATGCTATAGAGATTGCAGTAACAGATGGAGTGCATCCTTTAACAAGCTATATGATTAATTTTGTGAGGGTTTTATATGACTACCAGTCCACCTTGAAGCAACTGTTCCAAGAATTTGAAGGTGGAGACTATTCTTTGCAGCAGGCATCTGTAACTAAGCGAATAATGAAGGCTTTGGAATCCAAATTAGATTTGAAGTCAAAGCAGTATAGAGACCCTGCATTTAAGCATATTTTTCTCATGAACAATATTTATTATATTGTTAAATTTGTTCAGAGCTCTGAAGCCAAGGATATATTAGGGGATGATTGGGTACGACTACATAGTGGAATTGTGCAGCACCATGCAAATCAATACATAAGAAATGCTTGGGCAAAGACTCTGCAATGCCTATCTGATAAGGGTTTATATGTTGGCATGAACAATGGTGTTAGCAGAGCAGTTCTTAAGGACAGGTTGAAGACATTCAATGATATGTTTGAGGAACTCCATCGGAAGCAATCTCAATGGAAAGTTCCTGACGCTGAATTGCAAGAGTCTCTACAGCTTGCAGTTGCTATGATCGTGTTGCCTGGCTATAGAACCTTTGTGGGACGTTTTGGGTCTTTTTTGAAGGTTAAGCACATCAAATACACAGCAGAAGATCTAGAACAAATGTTGGGTGACTTTTTCGAAGGAAAATTCATGAGCCAAGCGAAACGATAA 2277 0.4181 MAAELLGGAAIGAVFGELLKAVLEVKDKASNFKNTLAYLRTILVKIDPLIKEMEQQNDELGRPKEELDSLIEEMEEGTKLVYRCSKIHRLNFLARIQYQDELAKLVVSLERFFRFDVPAQTSRDTKETLLKVTRILSAVRKLPLARTESATGSASDLDSMTLESYVCDTLPLQLNDEKEREADSTEEAAELERLAKPVLEDIASLVQKGSQAEAEIHKGRQDLQNKHEASGRLRSSIEFFGSRMGFTVSDSILFHENNLIAEDISKLEDAFKQLLSFFSKPVEPKHLFDCLTSSMRPSSGSPGHEGDPSGKKPSSSHHSESHENNNSADPVLCTLLNLIPSRIVSPLHYLAQQLVEAGQQQQLLRIYRDARSNWLEESIQIFGVEKLNNDDAQKLQLEILEAKIGSWHIMPIAVKLFAGERNVCNLIFEGFDSLAEQCFSEVTTNNISMLLSIGEANAKIIKSPQNFHLLLDMCETMLQLHLEIETLFRGKACTEIREAVFRFTKQLAQMANEVFGDLEEVVEKDAIEIAVTDGVHPLTSYMINFVRVLYDYQSTLKQLFQEFEGGDYSLQQASVTKRIMKALESKLDLKSKQYRDPAFKHIFLMNNIYYIVKFVQSSEAKDILGDDWVRLHSGIVQHHANQYIRNAWAKTLQCLSDKGLYVGMNNGVSRAVLKDRLKTFNDMFEELHRKQSQWKVPDAELQESLQLAVAMIVLPGYRTFVGRFGSFLKVKHIKYTAEDLEQMLGDFFEGKFMSQAKR* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2600 758 MobiDBLite consensus disorder prediction 310 324 - -
Amo09g2600 758 MobiDBLite consensus disorder prediction 293 326 - -
Amo09g2600 758 Pfam Exo70 exocyst complex subunit 415 745 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo09g2600 758 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 200 753 - -
Amo09g2600 758 Coils Coil 174 195 - -
Amo09g2600 758 Gene3D Exocyst complex component Exo70 309 758 - -
Amo09g2600 758 Gene3D Exocyst complex component Exo70 202 302 - -
Amo09g2600 758 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 133 IPR008808 -
Amo09g2600 758 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Amo09g2600 758 PANTHER EXOCYST COMPLEX PROTEIN EXO70 200 753 IPR004140 GO:0000145|GO:0006887
Amo09g2600 758 SUPERFAMILY Cullin repeat-like 206 749 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2600 Amo-Chr9 103357419 103363775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo09g2600 211 758 EXO70 exocyst subunit family AT5G03540 52.872 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2600 K07195 - aip:107617867 1401.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g2857 19 132431540 132438642 Amo09g2600 09 103357419 103363775 hybridization